Job Description P00904 Confidence 20.53% Date Wed Jan 25 15:20:09 GMT 2012 Rank 472 Aligned Residues 52 % Identity 23% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	I	L	L	L	D	N	I	D	S	F	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S	P	G
Query Conservation
Alig confidence				.					.																														.	.	.
Template Conservation				.					.																														.	.	.
Template Sequence		M	K	.	V	I	I	I	.	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	.	.	.	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G
Template Known Secondary structure				.					.																T	T								S					.	.	.								S	S	S					S		T
Template Predicted Secondary structure				.					.																														.	.	.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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