Return to main results Retrieve Phyre Job Id

Job DescriptionP00904
Confidence96.29%DateWed Jan 25 15:20:09 GMT 2012
Rank74Aligned Residues93
% Identity16%Templatec3f5dA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:protein ydea; PDBTitle: crystal structure of a protein of unknown function from2 bacillus subtilis
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1...... ..10.........20. ........30.........40.. .......50.........60.......
Predicted Secondary structure 

...



.











.........













Query SS confidence 






. . .













.




















. . . . . . . . .
























Query Sequence  MADILLL. . . DNIDSFTYNLADQL. RSNGHNVVIYRNHIPAQTLIE. . . . . . . . . RLATMSNPVLMLSPGPGVPSEAGCM
Query Conservation 
  



...
  


   
   
.   
  
 
   
        ......... 
       







   
    
Alig confidence 






...













.




















.........
























Template Conservation 



 


 


   
       
       
   
    
 
  
  
  
          
 

  
          
Template Sequence  LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPIVSSIGGFKTSVDYIIGLEPANFNLLVXIGGDSWSNDNKKL
Template Known Secondary structure 


SSB
TTTSTSTTSSSBTTS

STTSS
S

S

BS





Template Predicted Secondary structure 


































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   68.70.... .....80.........90...
Predicted Secondary structure  .




Query SS confidence 






.


















Query Sequence  PELLTRL. RGKLPIIGICLGHQAIVEA
Query Conservation    
    .    







 


   
Alig confidence 






.


















Template Conservation     
         
 


 
   

 
Template Sequence  LHFVKTAFQKNIPIAAICGAVDFLAKN
Template Known Secondary structure  TT

TT
Template Predicted Secondary structure 





Template SS confidence 


























   83......90.........100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions