Job Description P00904 Confidence 29.43% Date Wed Jan 25 15:20:09 GMT 2012 Rank 395 Aligned Residues 78 % Identity 14% Template c3brsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans Resolution 2.00 Å

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		2	.	.	.	.	.					.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.								.	.	.	.																									.	.	.	.	.
Query SS confidence								.	.	.	.								.	.	.	.																									.	.	.	.	.
Query Sequence		A	D	I	L	L	L	.	.	.	.	D	N	I	D	S	F	T	.	.	.	.	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	.	.	.	.	.	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S	P	G	P	G	V	P	S	E	A	G	C	M	P
Query Conservation								.	.	.	.								.	.	.	.																									.	.	.	.	.
Alig confidence								.	.	.	.								.	.	.	.																									.	.	.	.	.																						.	.	.	.
Template Conservation																																																																									.	.	.	.
Template Sequence		Y	Y	M	I	C	I	P	K	V	L	D	D	S	S	D	F	W	S	V	L	V	E	G	A	Q	M	A	A	K	E	Y	E	I	K	L	E	F	M	A	P	E	K	E	E	D	Y	L	V	Q	N	E	L	I	E	E	A	I	K	R	K	P	D	V	I	L	L	A	A	A	D	Y	.	.	.	.	E	K	T	Y	D
Template Known Secondary structure									S				S	S	S																		T									S	S	T	T															T			S							S		T	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																																									.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	T	R	L	R	G	K	L	P	I	I	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	E	I	K	D	A	G	I	K	L	I	V	I
Template Known Secondary structure				T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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