Job Description P00904 Confidence 24.94% Date Wed Jan 25 15:20:09 GMT 2012 Rank 423 Aligned Residues 75 % Identity 15% Template c2zkqb_ PDB info
PDB header: ribosomal protein/rnaChain: B: PDB Molecule: rna expansion segment es3;
PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution 8.70 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
3 . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . .
Predicted Secondary structure
Query SS confidence
Query Sequence
D I L L L D N I D S F T Y N L A D Q L R S N G H N V V I Y R N H I P A Q T L I E R L A T M S N P V L M L S P G P G V P S E A G C M P E L L T R L R G K L P I I G
Query Conservation
Alig confidence
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Template Conservation
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Template Sequence
D V S V I S S R N T G Q R A V L K F A A A T G A T P I A G R F T P G F T N Q I Q A A F R .
E P R L L V V .
T D P R A D H .
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Q P L T E A S Y V N L P T I A
Template Known Secondary structure
G S S S T T S S . S . S T T T T . . . . . T
Template Predicted Secondary structure
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Template SS confidence
72 . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . .
83 .
Predicted Secondary structure
Query SS confidence
Query Sequence
I C
Query Conservation
Alig confidence
Template Conservation
Template Sequence
L C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
146 .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
