Job Description P00904 Confidence 99.89% Date Wed Jan 25 15:20:09 GMT 2012 Rank 54 Aligned Residues 172 % Identity 20% Template c2ywdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: crystal structure of glutamine amidotransferase Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.																		.
Query SS confidence																																																											.	.	.	.	.																		.
Query Sequence		I	L	L	L	D	N	I	D	S	F	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S	P	G	P	G	V	.	.	.	.	.	P	S	E	A	G	C	M	P	E	L	L	T	R	L	R	G	K	.
Query Conservation																																																											.	.	.	.	.																		.
Alig confidence																.																					.	.	.	.	.	.	.	.	.														.	.	.	.	.																		.
Template Conservation																.																					.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	L	A	L	Q	G	D	F	R	E	H	K	.	E	A	L	K	R	L	G	I	E	A	K	E	V	R	K	K	E	H	L	E	.	.	.	.	.	.	.	.	.	G	L	K	A	L	I	V	P	G	G	E	S	T	T	I	G	K	L	A	R	E	Y	G	I	E	D	E	V	R	K	R	V	E	E	G	S
Template Known Secondary structure							S	S	S							.					T	T	T								S	G	G	G	G	T	.	.	.	.	.	.	.	.	.	T		S						S	S												T	T											T	T
Template Predicted Secondary structure																.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.										.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																						.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.
Query Sequence		L	P	I	I	G	I	C	L	G	H	Q	A	I	V	E	A	Y	G	G	Y	.	.	.	.	.	.	.	V	G	Q	A	G	E	I	L	H	G	K	A	S	S	I	E	H	D	G	Q	A	M	F	A	G	L	T	N	P	L	P	V	A	R	Y	H	S	L	V	G	S	N	I	P	A	G	L	T	I	N	A	H	F
Query Conservation																						.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	L	F	G	T	C	A	G	A	I	W	L	A	K	E	I	V	G	Y	P	E	Q	P	R	L	G	V	L	E	A	W	V	E	R	N	A	F	G	R	Q	V	E	S	F	E	E	D	L	E	V	E	G	L	G	S	F	H	G	V	F	I	R	A	P	V	F	R	R	L	G	E	G	V	E	V	L	A	R	L
Template Known Secondary structure								T											T	T		T	T													T	T		S			S	S	S									T	T	T									S									T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	M	V	M	A	V	R	H	D	A	D	R	V	C	G	F	Q	F	H	P	E	S	I	L	T	T	Q	G	A	R	L	L	E	Q	T	L	A	W	A
Query Conservation
Alig confidence												.	.																.	.	.
Template Conservation												.	.																.	.	.
Template Sequence		G	D	L	P	V	L	V	R	Q	G	.	.	K	V	L	A	S	S	F	H	P	E	L	T	E	D	P	.	.	.	R	L	H	R	Y	F	L	E	L	A
Template Known Secondary structure		T	T								T	.	.	T					S	S		G	G	G	S	S			.	.	.
Template Predicted Secondary structure												.	.																.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions