Return to main results Retrieve Phyre Job Id

Job DescriptionP00904
Confidence48.10%DateWed Jan 25 15:20:09 GMT 2012
Rank324Aligned Residues178
% Identity12%Templatec2yhsA_
PDB info PDB header:cell cycleChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the e. coli srp receptor ftsy
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   186...190.........200.........210.........220.........230.........240..... ....250... ..
Predicted Secondary structure 
















....


......
Query SS confidence 



























































. . . .







. . . . . .

Query Sequence  TLAWAQQKLEPANTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALVSMKIR. . . . GEHPNEIA. . . . . . GA
Query Conservation 

                
 
   
  

 


      

 
     





 


 
....


 


 ......
 
Alig confidence 



























































....







......

Template Conservation 
  
   
      
   
  
             
   

  

    
  
   
                  
   
Template Sequence  FARLKRSLLKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEM
Template Known Secondary structure  TTTSTTTT
B
STT

T

BGGG
Template Predicted Secondary structure 














Template SS confidence 















































































   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   256...260.........270.. .......280.........290.........300.........310.........320.. .......
Predicted Secondary structure 









..

























....




Query SS confidence 
















. .

















































. . . .






Query Sequence  ATALLENAAPFPRPDYL. . FADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLL. . . . AAFGINL
Query Conservation    
              .. 

  





  
 


   
 



 

 
 


 
  

  



 
....
 

   
Alig confidence 
















..













..





















..









....






Template Conservation     
               

  

  
 



..
 



      
  
 


 
..
 
 

 



  
   

  
Template Sequence  GEILAKVDEPLNVEGKAPFVILMVGVNGVGKTT. . TIGKLARQFEQQGKSVMLAAGD. . TFRAAAVEQLQVWGQRNNIPV
Template Known Secondary structure  TTB





S
TT

TTSS..TT




..TT
T

Template Predicted Secondary structure 



















..





..




Template SS confidence 















































































   276...280.........290.........300........ .310.........320.........330 .........340.........350.
 
   330........ .340.........350.........360.......
Predicted Secondary structure  .....


......


Query SS confidence  . . . . .








. . . . . .




























Query Sequence  . . . . . DMNADKSRQ. . . . . . ALDELGVCFLFAPKYHTGFRHAMPVRQQL
Query Conservation  .....  
      ...... 
   
  
  
    

   
  

  
Alig confidence  .....








......




























Template Conservation         
        
        
 







   
  
  

  
Template Sequence  IAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKI
Template Known Secondary structure 

STT

TT
S



S


Template Predicted Secondary structure 

















Template SS confidence 
















































   352.......360.........370.........380.........390.........400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions