Job Description P00904 Confidence 99.95% Date Wed Jan 25 15:20:09 GMT 2012 Rank 43 Aligned Residues 204 % Identity 21% Template c2v4uA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ctp synthase 2; PDBTitle: human ctp synthetase 2 - glutaminase domain in complex with2 5-oxo-l-norleucine Resolution 2.3 Å

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		1	.	.	.	.	.										.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.												.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	D	I	L	L	.	.	.	.	.	.	.	.	.	L	D	N	I	D	S	F	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	.	.	.	.	.	.	.	.	.	.	.	T	M	S	N	P	V	L	M	L	S	P	G	P	G	V
Query Conservation								.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	C	S	I	A	L	V	G	K	Y	T	K	L	R	D	C	Y	A	S	V	F	K	A	L	E	H	S	A	L	A	I	N	H	K	L	N	L	M	Y	I	D	S	I	D	L	E	K	I	T	E	T	E	D	P	V	K	F	H	E	A	W	Q	K	L	C	K	A	D	G	I	L	V	P	G	G	F	G	I
Template Known Secondary structure												S		S	S			G	G	G														T	T										G	G	G	G	S																						S						S			S	S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																														.	.	.	110	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	E	A	G	C	M	P	E	L	L	T	R	L	R	G	K	L	P	I	I	G	I	C	L	G	H	Q	A	I	V	E	A	Y	G	G	Y	V	G	Q	A	G	E	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	A	S	S
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		R	G	T	L	G	K	L	Q	A	I	S	W	A	R	T	K	K	I	P	F	L	G	V	L	.	G	M	Q	L	A	V	I	E	F	A	R	N	C	L	N	L	K	D	A	D	S	T	E	F	R	P	N	A	P	V	P	L	V	I	D	M	P	E	H	N	P	G	N	L	G	G	T	M	R	L	G	I	R	R	T
Template Known Secondary structure		T	T														T	T								.														S			T	T				S	T	T		T	T		S									B			T	T		S	S		B
Template Predicted Secondary structure																										.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150		.	.		.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.		.	.	.	.	.	.
Predicted Secondary structure																	.	.	.														.	.	.	.	.	.												.			.														.								.
Query SS confidence																	.	.	.														.	.	.	.	.	.												.			.														.								.
Query Sequence		I	E	H	D	G	Q	A	M	F	A	G	L	T	N	P	.	.	.	L	P	V	A	R	Y	H	S	L	V	G	S	N	.	.	.	.	.	.	I	P	A	G	L	T	I	N	A	H	F	.	N	G	.	M	V	M	A	V	R	H	D	A	D	R	V	C	.	G	F	Q	F	H	P	E	.	S	I	L	T	T	Q
Query Conservation																	.	.	.														.	.	.	.	.	.												.			.														.								.
Alig confidence																	.	.	.														.	.	.	.	.	.												.			.														.								.
Template Conservation
Template Sequence		V	F	K	T	E	N	S	I	L	R	K	L	Y	G	D	V	P	F	I	E	E	R	H	R	H	R	F	E	V	N	P	N	L	I	K	Q	F	E	Q	N	D	L	S	F	V	G	Q	D	V	D	G	D	R	M	E	I	I	E	L	A	N	H	P	Y	F	V	G	V	Q	F	H	P	E	F	S	S	R	P	M	K
Template Known Secondary structure				S		S								T	T	S		S														G	G	G	S	G	G	G	T	T	S	S								T	T	S		S							S	S	S	S						S	S	B	G	G	G	G		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	L	L	E	Q	T	L	A	W	A	Q	Q	K	L	E	P	A	N	T	L	Q	P	I	L	E	K	L	Y	Q	A	Q	T	L	S
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		P	S	P	P	Y	L	G	L	L	L	A	A	T	G	N	L	N	.	.	.	.	.	.	.	.	.	A	Y	L	Q	Q	G	C	K	L	S
Template Known Secondary structure															T				.	.	.	.	.	.	.	.	.					T	T		T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.										.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions