Job Description P00904 Confidence 21.84% Date Wed Jan 25 15:20:09 GMT 2012 Rank 457 Aligned Residues 53 % Identity 11% Template c2kztB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:programmed cell death protein 4; PDBTitle: structure of the tandem ma-3 region of pdcd4 Resolution UNK

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	H	P	E	S	I	L	T	T	Q	G	A	R	L	L	E	Q	T	L	A	W	A	Q	Q	K	L	E	P	A	N	T	L	Q	P	I	L	E	K	L	Y	Q	A	Q	T	L	S	Q	Q	E	S	H	Q	L	F	S	A	V	V	R
Query Conservation
Alig confidence										.	.	.	.	.					.	.
Template Conservation										.	.	.	.	.					.	.
Template Sequence		H	F	H	H	E	L	V	Y	.	.	.	.	.	E	A	I	V	.	.	M	V	L	E	S	T	G	E	S	A	F	K	M	I	L	D	L	L	K	S	L	W	K	S	S	T	I	T	I	D	Q	M	K	R	G	Y	E	R	I	Y	N
Template Known Secondary structure		G	G	G						.	.	.	.	.					.	.							S																	T	T		S
Template Predicted Secondary structure										.	.	.	.	.					.	.
Template SS confidence
		358	.	360	.	.	.	.	.						.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions