Job Description P00904 Confidence 25.59% Date Wed Jan 25 15:20:09 GMT 2012 Rank 417 Aligned Residues 126 % Identity 17% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																								.	.	.	.																												.	.	.	.	.	.	.	.								.	.
Query SS confidence																								.	.	.	.																												.	.	.	.	.	.	.	.								.	.
Query Sequence		A	N	T	L	Q	P	I	L	E	K	L	Y	Q	A	Q	T	L	S	Q	Q	E	S	.	.	.	.	H	Q	L	F	S	A	V	V	R	G	E	L	K	P	E	Q	L	A	A	A	L	V	S	M	K	I	R	.	.	.	.	.	.	.	.	G	E	H	P	N	E	I	.	.	A	G	A	A	T	A	L	L	E	N
Query Conservation																								.	.	.	.																												.	.	.	.	.	.	.	.								.	.
Alig confidence																								.	.	.	.																												.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		S	A	R	L	Q	E	A	I	G	R	L	R	G	R	G	R	I	T	E	E	D	L	K	A	T	L	R	E	I	R	R	A	L	M	D	A	D	V	N	L	E	V	A	R	D	F	V	E	R	V	R	E	E	A	L	G	K	Q	V	L	E	S	L	T	P	A	E	V	I	L	A	T	V	Y	E	A	L	K	E	A
Template Known Secondary structure											T	T	T	T	S		S																				T	T																				T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
						263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	A	P	F	P	R	P	D	Y	L	F	A	D	I	V	G	T	G	G	D	G	S	N	S	I	N	I	S	T	A	S	A	F	V	A	A	A	C	G	L	K	V	A	K	H	G	N	R	S	V	S	S	K	S	G	S	S	D	L	L	A	A	F	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																									.	.																							.	.
Template Conservation																														.	.																							.	.
Template Sequence		L	G	G	E	A	R	L	P	V	L	K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	.	.	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	.	.	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G
Template Known Secondary structure		T	T	S	S								S	S								S	T	T	S	S				.	.											T	T	T										.	.		S	S	T	T
Template Predicted Secondary structure																														.	.																							.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions