Job Description P00904 Confidence 99.92% Date Wed Jan 25 15:20:09 GMT 2012 Rank 49 Aligned Residues 170 % Identity 18% Template c2issF_ PDB info PDB header:lyase, transferase Chain: F: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: structure of the plp synthase holoenzyme from thermotoga maritima Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.
Query Sequence		D	I	L	L	L	D	N	I	D	S	F	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S	P	G	P	G	V	P	S	E	A	.	.	.	.	.	G	C	M	P	E	L	L	T	R	L	R	G	K
Query Conservation																																																																.	.	.	.	.
Alig confidence											.																						.	.	.	.	.	.	.						.	.																		.	.	.	.	.
Template Conservation											.																						.	.	.	.	.	.	.						.	.
Template Sequence		K	I	G	V	L	G	V	Q	G	.	D	V	R	E	H	V	E	A	L	H	K	L	G	V	E	T	L	I	V	K	L	.	.	.	.	.	.	.	P	E	Q	L	D	.	.	M	V	D	G	L	I	L	P	G	G	E	S	T	T	M	I	R	I	L	K	E	M	D	M	D	E	K	L	V	E	R	I	N	N	G
Template Known Secondary structure								S	S	S	.												T	T								S	.	.	.	.	.	.	.	G	G	G	G	G	.	.	G		S						S	S												T	T											T	T
Template Predicted Secondary structure											.																						.	.	.	.	.	.	.						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		L	P	I	I	G	I	C	L	G	H	Q	A	I	V	E	A	Y	G	G	Y	V	.	.	.	.	.	G	Q	A	G	E	I	L	H	G	K	A	S	S	I	E	H	D	G	Q	A	M	F	A	G	L	T	N	P	L	P	V	A	R	Y	H	S	L	V	G	S	N	I	P	A	G	L	T	I	N	A	H	F	N	G
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		L	P	V	F	A	T	C	A	G	V	I	L	L	A	K	R	I	K	Q	E	K	L	G	V	L	D	I	T	V	E	R	N	A	Y	G	R	Q	V	E	S	F	E	T	F	V	E	I	P	A	V	G	K	D	P	F	R	A	I	F	I	R	A	P	R	I	V	E	T	G	K	N	V	E	I	L	A	T	Y	D	Y
Template Known Secondary structure								T																								T	T	T	T		S	G	G	G									G	G	G		S	S							S	S									S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	M	A	V	R	H	D	A	D	R	V	C	G	F	Q	F	H	P	E	S	I	L	T	T	Q	G	A	R	L	L	E	Q	T	L
Query Conservation
Alig confidence									.	.															.	.	.
Template Conservation									.	.															.	.	.
Template Sequence		D	P	V	L	V	K	E	.	.	G	N	I	L	A	C	T	F	H	P	E	L	T	D	.	.	.	D	L	R	L	H	R	Y	F	L
Template Known Secondary structure									.	.	T	T					S	S		G	G	G	S	S	.	.	.
Template Predicted Secondary structure									.	.															.	.	.
Template SS confidence
		155	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions