Job Description P00904 Confidence 20.42% Date Wed Jan 25 15:20:09 GMT 2012 Rank 474 Aligned Residues 106 % Identity 13% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	M	F	A	G	L	T	N	P	L	P	V	A	R	Y	H	S	L	V	G	S	N	I	P	A	G	L	T	I	N	A	H	F	N	G	M	V	M	A	V	R	H	D	A	D	R	V	C	G	F	Q	F	H	P	E	S	I	L	T	T	Q	G	A	R	L	L	E	Q	T	L	A	W	A	Q	Q	K	L	E	P
Query Conservation
Alig confidence																																																													.																				.
Template Conservation																																																													.																				.
Template Sequence		E	E	Y	L	R	R	E	P	Q	K	F	R	L	A	R	I	A	R	L	A	V	P	P	A	Y	Q	D	V	Y	V	S	P	D	A	E	N	E	L	Q	A	F	G	R	D	A	A	G	R	L	Q	Y	R	Y	H	P	D	F	V	Q	.	A	G	A	L	K	K	W	Q	R	L	T	R	F	A	G	A	L	P	T	.
Template Known Secondary structure		T	T	S																T				T	T								S	S	T	T		S								T	T	S								G	G	G	T	S	.	T	T		S																.
Template Predicted Secondary structure																																																													.																				.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	T	L	Q	P	I	L	E	K	L	Y	Q	A	Q	T	L	S	Q	Q	E	S	H	Q	L	F	S	A	V	V	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	L	K	V	A	T	T	A	D	L	R	A	S	G	L	P	P	R	K	V	X	A	L	X	T	R	L	L	H
Template Known Secondary structure		.	.	.										T	S	S	S	B
Template Predicted Secondary structure		.	.	.
Template SS confidence
					105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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