Return to main results Retrieve Phyre Job Id

Job DescriptionP00904
Confidence92.85%DateWed Jan 25 15:20:09 GMT 2012
Rank97Aligned Residues75
% Identity15%Templatec2f00A_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40....... ..50.........60......
Predicted Secondary structure 


















..............











Query SS confidence 














































. . . . . . . . . . . . . .


















Query Sequence  MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATM. . . . . . . . . . . . . . SNPVLMLSPGPGVPSEAGC
Query Conservation 
  




  


   
   
   
  
 
   
         
   ..............    







   
   
Alig confidence 






























..













..............










.....


Template Conservation   
 
  

 

 
 
 

  
   
  
   ..
         
   

              
 

 



.....   
Template Sequence  VRHIHFVGIGGAGXGGIAEVLANEGYQISGS. . DLAPNPVTQQLXNLGATIYFNHRPENVRDASVVVVSSAI. . . . . SAD
Template Known Secondary structure 

TTTSTTTT
..
SS

TT
SS

GGGGTT
S
TT
.....
TT
Template Predicted Secondary structure 








..


















.....


Template SS confidence 















































































   1920.........30.........40......... 50.........60.........70.........80........ .90.
 
   67..70.........80..
Predicted Secondary structure 




Query SS confidence 















Query Sequence  MPELLTRLRGKLPIIG
Query Conservation     
        



Alig confidence 















Template Conservation   
    
    
 
  
Template Sequence  NPEIVAAHEARIPVIR
Template Known Secondary structure 
TT

Template Predicted Secondary structure 




Template SS confidence 















   92.......100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions