Job Description P00904 Confidence 56.88% Date Wed Jan 25 15:20:09 GMT 2012 Rank 291 Aligned Residues 78 % Identity 10% Template c1s1hB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	I	L	L	L	D	N	I	D	S	F	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S	P	G	P	G	V	P	S	E	A	G	C	M	P	E	L	L	T	R	L	R	G	K	L	P	I
Query Conservation
Alig confidence																																																								.								.	.	.	.	.
Template Conservation																																																								.								.	.	.	.	.
Template Sequence		P	E	D	V	V	A	I	S	S	R	T	F	G	Q	R	A	V	L	K	F	A	A	H	T	G	A	T	P	I	A	G	R	F	T	P	G	S	F	T	N	Y	I	T	R	S	F	K	E	P	R	L	V	I	V	.	T	D	P	R	S	D	A	.	.	.	.	.	Q	A	I	K	E	A	S	Y	V	N	I	P	V
Template Known Secondary structure		T									S													T	S	S						S				T	T	T	T	T	T	T	T	T	S		S				S					.	S		T	T	T	T		.	.	.	.	.										T
Template Predicted Secondary structure																																																								.								.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.
		81	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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