Job Description P0AAQ6 Confidence 4.36% Date Thu Jan 5 11:13:31 GMT 2012 Rank 58 Aligned Residues 45 % Identity 13% Template c3q2tC_ PDB info PDB header:rna binding protein/rna Chain: C: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; PDBTitle: crystal structure of cfim68 rrm/cfim25/rna complex Resolution 3.06 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		P	L	F	K	E	F	G	A	L	R	I	V	E	C	.	W	A	S	D	V	P	D	G	K	V	T	D	F	R	M	A	V	K	A	E	E	N	E	E	V	V	F	S	W	I	E	Y	P	S	K	E	V	R	D	A	A	N	Q	K	M
Query Conservation																.
Alig confidence																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	V	H	S	L	G	V	N	D	I	L	E	I	K	F	F	E	N	R	A	N	G	Q	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	L	V	G	V	G	S	E	A	S	S	K	K	L	M	D	L	L
Template Known Secondary structure					G	G	G	T													T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S	S									S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.															.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions