Job Description P0AAQ6 Confidence 3.40% Date Thu Jan 5 11:13:31 GMT 2012 Rank 81 Aligned Residues 66 % Identity 17% Template c3ns5B_ PDB info PDB header:translation Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b; PDBTitle: crystal structure of the rna recognition motif of yeast eif3b residues2 76-161 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	V	V	A	V	P	A	D	K	K	D	A	Y	R	E	M	A	A	K	A	A	P	L	F	K	E	F	G	A	L	R	I	V	E	C	W	A	S	D	V	P	D	G	K	V	T	D	F	R	M	A	V	K	A	E	E	N	E	E	V	V	F	S	W	I	E	Y	P	S	K	E	V	R	D	A	A	N	Q	K
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	V	N	G	A	P	V	I	P	S	A	K	V	P	V	L	K	K	A	L	T	S	L	F	S	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	V	N	M	E	F	P	I	D	E	A	T	G	K	T	K	G	F	L	F	V	E	C	G	S	M	N	D	A	K	K	I	I	K	S
Template Known Secondary structure						S					B	G	G	G													T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	T	T				S							S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		86
Predicted Secondary structure
Query SS confidence
Query Sequence		M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		144

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions