Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAQ6
Confidence17.55%DateThu Jan 5 11:13:31 GMT 2012
Rank20Aligned Residues68
% Identity9%Templatec3chgB_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:glycine betaine-binding protein; PDBTitle: the compatible solute-binding protein opuac from bacillus2 subtilis in complex with dmsa
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 























Query SS confidence 




































































Query Sequence  EMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSD
Query Conservation    
  
  
  
 


  

 
 



 
  
 
  

 
   







 




 


   


 
Alig confidence 
























.










































Template Conservation      
   
  
   

 
  

  .
 
 
  

 

    
  
  
   
      
 
   


 
Template Sequence  EMGEIMIKVEEGEKPAKVAAEYVNK. HKDQIAEWTKGVQKVKGDKINLAYVAWDSEIASTNVIGKVLED
Template Known Secondary structure  TT

.

TTT



SS



T
Template Predicted Secondary structure 



.









Template SS confidence 




































































   127..130.........140.........150. ........160.........170.........180.........190....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions