Job Description P0AAQ6 Confidence 100.00% Date Thu Jan 5 11:13:31 GMT 2012 Rank 2 Aligned Residues 109 % Identity 100% Template c2okqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ybaa; PDBTitle: crystal structure of unknown conserved ybaa protein from2 shigella flexneri Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	Y	V	D	G	F	V	V	A	V	P	A	D	K	K	D	A	Y	R	E	M	A	A	K	A	A	P	L	F	K	E	F	G	A	L	R	I	V	E	C	W	A	S	D	V	P	D	G	K	V	T	D	F	R	M	A	V	K	A	E	E	N	E	E	V	V	F	S	W	I	E	Y	P	S	K	E	V	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	Y	V	D	G	F	V	V	A	V	P	A	D	K	K	D	A	Y	R	E	M	A	A	K	A	A	P	L	F	K	E	F	G	A	L	R	I	V	E	C	W	A	S	D	V	P	D	G	K	V	T	D	F	R	M	A	V	K	A	E	E	N	E	E	V	V	F	S	W	I	E	Y	P	S	K	E	V	R	D
Template Known Secondary structure		S												G	G	G																		T	T		S								S	S					S	S							T	T			T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	N	Q	K	M	M	S	D	P	R	M	K	E	F	G	E	S	M	P	F	D	G	K	R	M	I	Y	G	G	F	E	S	I	I	D	E
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		A	A	N	Q	K	M	M	S	D	P	R	.	.	.	.	.	.	.	.	P	F	D	G	K	R	M	I	Y	G	G	F	E	S	I	I	D	E
Template Known Secondary structure										S			.	.	.	.	.	.	.	.				T	T	T									S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions