Return to main results Retrieve Phyre Job Id

Job DescriptionP76655
Confidence18.48%DateThu Jan 5 12:25:14 GMT 2012
Rank56Aligned Residues108
% Identity12%Templatec2ww8A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:cell wall surface anchor family protein; PDBTitle: structure of the pilus adhesin (rrga) from streptococcus2 pneumoniae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   683......690.........700.........710.........720.........730.........740. ........750.........
Predicted Secondary structure 



























...








Query SS confidence 


























































. . .

















Query Sequence  TNRYGIGVIPSVSSYITTSLSVDTRNLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQ. . . IIGVIRLADGSHPPLGIS
Query Conservation 

  
 



 
 

  
 
 

   

  
 
      
 
  



   
       ... 
  
    
  

 

 
Alig confidence 


























































...















.
Template Conservation      
               
                  
    
 
   
 
      
 

 
 
           . 
Template Sequence  YDTNGRTTLHPKEVEQNTVRDFPIPKIRDVRKYPEITISKEKKLGDIEFIKVNKNDKKPLRGAVFSLQKQHPDYPDIY. G
Template Known Secondary structure  SBSS
SBTT
TT












B

TTT

B
SS

SS
SS
.
Template Predicted Secondary structure 





































.
Template SS confidence 















































































   692.......700.........710.........720.........730.........740.........750.........760......... 770
 
   760.........770.........780.........790..
Predicted Secondary structure 













Query SS confidence 
































Query Sequence  VKDETSHKELGLVADGGFVYLNGIQDDNKLALR
Query Conservation 
           

  
   
        
 
 
Alig confidence 

























.





Template Conservation              
   
   
  
  .
 
 
 
Template Sequence  AIDQNGTYQNVRTGEDGKLTFKNLSD. GKYRLF
Template Known Secondary structure 
SSSS
TTSS

TT

S.
Template Predicted Secondary structure 














.
Template SS confidence 
































   771........780.........790...... ...800..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions