Return to main results Retrieve Phyre Job Id

Job DescriptionP76159
Confidence100.00%DateThu Jan 5 12:19:52 GMT 2012
Rank10Aligned Residues135
% Identity18%Templated169la_
SCOP infoLysozyme-like Lysozyme-like Phage lysozyme
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.. .......70.........80.........90...
Predicted Secondary structure 


















.............








Query SS confidence 



































. . . . . . . . . . . . .






























Query Sequence  LDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKT. . . . . . . . . . . . . VFPNMKLSKEKCDQVNAIERDKALAWVERNI
Query Conservation      
   

    

 
  
  






   
  .............
  
   
   
  

  

      
   
Alig confidence 



































.............






























Template Conservation   
 


  

     
 
  
  




                        
  

  

  

  

      
    
Template Sequence  IFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNA
Template Known Secondary structure  TT



SS

TTSSS
TS

TTB

T
T
Template Predicted Secondary structure 


































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   94.. ...100.........110.........120 .........130.........140.........150.........160.......
Predicted Secondary structure 


.....












.
















Query SS confidence 


. . . . .























.














































Query Sequence  KVP. . . . . LTEPQKAGIASFCPYNIGPGKCFP. STFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQE
Query Conservation     .....
 
 
  

 

 


 
 
    .

    

 
    

     
    

          

  

  
Alig confidence 


.....











.










.

























............








Template Conservation          
      



 . 

 
       
     
  

   

 
   
 
  ............    
  
 
Template Sequence  KLKPVYDSLDAVRRCALINM. VFQMGETGVAGFTNSLRMLQQKRWDAAAAALAAAAWAA. . . . . . . . . . . . ATPNRAKRV
Template Known Secondary structure  TS
.T
TT
TTS............S
Template Predicted Secondary structure 









.









............



Template SS confidence 















































































   83......90.........100.. .......110.........120.........130.........140 .........
 
   168.170....
Predicted Secondary structure 
Query SS confidence 






Query Sequence  SALTCWG
Query Conservation    


 
Alig confidence 






Template Conservation        
Template Sequence  ITTFRTG
Template Known Secondary structure  SS
Template Predicted Secondary structure 

Template SS confidence 






   150......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions