Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 9 Aligned Residues 264 % Identity 15% Template d2a1ha1 SCOP info D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes Resolution 1.80

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		3	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure							.	.	.	.																												.	.	.	.	.
Query SS confidence							.	.	.	.																												.	.	.	.	.
Query Sequence		L	I	N	G	H	.	.	.	.	K	Q	E	S	L	A	V	S	D	R	A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	.	.	.	.	.	K	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	P	Q	L	E	Q	E	M	K	T	L	A	A	E
Query Conservation							.	.	.	.																												.	.	.	.	.
Alig confidence							.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		W	G	Q	P	R	I	Q	P	F	Q	N	L	T	L	H	P	A	S	S	S	L	H	Y	S	L	Q	L	F	E	G	M	K	A	F	K	G	K	D	Q	Q	V	R	L	F	R	P	W	L	N	M	D	R	M	L	R	S	A	M	R	L	C	L	P	S	F	D	K	L	E	L	L	E	C	I	R	R	L	I	E	V
Template Known Secondary structure										S							T	T	B					S														T	T	S						S															T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		74										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.		.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																																								.													.
Query SS confidence			.	.	.	.	.	.	.	.	.																																																								.													.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	Q	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N	S	G	P	A	T	R	I	L	S	V	T	A	Y	P	A	H	Y	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	.	L	G	R	N	P	H	L	A	G	I	K	H	.	L
Query Conservation			.	.	.	.	.	.	.	.	.																																																								.													.
Alig confidence			.	.	.	.	.	.	.	.	.																							.	.																																.													.
Template Conservation																																		.	.
Template Sequence		D	K	D	W	V	P	D	A	A	G	T	S	L	Y	V	R	P	V	L	I	G	N	E	P	S	L	G	V	S	Q	P	R	.	.	R	A	L	L	F	V	I	L	C	P	V	G	A	Y	F	P	G	G	S	V	T	P	V	S	L	L	A	D	P	A	F	I	R	A	W	V	G	G	V	G	N	Y	K	L	G	G
Template Known Secondary structure		T	G	G	G	S			S	T	T														B			S		S			S	.	.														S	S	S	S	S	S										T	T			S			T	T	S	S	T	T	S		B	G	G
Template Predicted Secondary structure																																		.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.
Predicted Secondary structure																										.																				.	.	.	.	.																													.
Query SS confidence																										.																				.	.	.	.	.																													.
Query Sequence		N	R	L	E	Q	V	L	I	R	S	H	L	E	Q	T	N	A	D	E	A	L	V	L	D	.	S	E	G	W	V	T	E	C	C	A	A	N	L	F	W	R	K	G	N	.	.	.	.	.	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	.	Y	Q
Query Conservation																										.																				.	.	.	.	.																													.
Alig confidence																										.																				.	.	.	.	.																													.
Template Conservation
Template Sequence		N	Y	G	P	T	V	L	V	Q	Q	E	A	L	K	R	G	C	E	Q	V	L	W	L	Y	G	P	D	H	Q	L	T	E	V	G	T	M	N	I	F	V	Y	W	T	H	E	D	G	V	L	E	L	V	T	P	P	L	N	G	V	I	L	P	G	V	V	R	Q	S	L	L	D	M	A	Q	T	W	G	E	F	R
Template Known Secondary structure		G	T	T	T											T	T		S							T	T	T	T						T	T										T	T	S										S	S	S	S																	T	S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.																						.	.	.	.						.	.	.	.
Query SS confidence																.	.	.	.	.	.																						.	.	.	.						.	.	.	.
Query Sequence		L	V	E	V	Q	A	S	L	E	E	S	L	Q	A	.	.	.	.	.	.	D	E	M	V	I	C	N	A	L	M	P	V	M	P	V	C	A	C	G	D	V	.	.	.	.	S	F	S	S	A	.	.	.	.	T	L	Y	E	Y	L	A	P	L	C	E	R	P
Query Conservation																.	.	.	.	.	.																						.	.	.	.						.	.	.	.
Alig confidence																.	.	.	.	.	.																						.	.	.	.						.	.	.	.
Template Conservation
Template Sequence		V	V	E	R	T	I	T	M	K	Q	L	L	R	A	L	E	E	G	R	V	R	E	V	F	G	S	G	T	A	C	Q	V	C	P	V	H	R	I	L	Y	K	D	R	N	L	H	I	P	T	M	E	N	G	P	E	L	I	L	R	F	Q	K	E	L	K	E	I
Template Known Secondary structure								B										T	T										T	T	T											T	T						T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions