Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 4 Aligned Residues 267 % Identity 21% Template d1iyea_ SCOP info D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes D-aminoacid aminotransferase-like PLP-dependent enzymes Resolution 1.82

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		2	.	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure								.	.	.	.																													.	.	.	.																										.
Query SS confidence								.	.	.	.																													.	.	.	.																										.
Query Sequence		F	L	I	N	G	H	.	.	.	.	K	Q	E	S	L	A	V	S	D	R	A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	K	.	.	.	.	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	.	P	Q	L	E	Q	E	M	K	T	L	A	A
Query Conservation								.	.	.	.																													.	.	.	.																										.
Alig confidence								.	.	.	.																													.	.	.	.																										.
Template Conservation
Template Sequence		I	W	F	N	G	E	M	V	R	W	E	D	A	K	V	H	V	M	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	C	Y	D	S	H	K	G	P	V	V	F	R	H	R	E	H	M	Q	R	L	H	D	S	A	K	I	Y	R	F	P	V	S	Q	S	I	D	E	L	M	E	A	C	R	D	V	I	R
Template Known Secondary structure					T	T					G	G	G					T	T																				T	T	S	S				T																T					S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		73	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																																							.																						.	.
Query SS confidence					.	.																																							.																						.	.
Query Sequence		E	Q	Q	.	.	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N	S	G	P	A	T	R	I	L	S	V	T	A	Y	P	A	H	Y	.	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	L	G	R	N	P	.	.	H	L	A	G	I	K	H	L	N	R	L	E	Q
Query Conservation					.	.																																							.																						.	.
Alig confidence					.	.																																							.																						.	.
Template Conservation
Template Sequence		K	N	N	L	T	S	A	Y	I	R	P	L	I	F	V	G	D	V	G	M	G	V	N	P	P	A	G	Y	S	T	D	V	I	I	A	A	F	P	W	G	A	Y	L	G	A	E	A	L	E	Q	G	I	D	A	M	V	S	S	W	N	R	A	A	P	N	T	I	P	T	A	A	K	A	G	G	N	Y	L	S	S
Template Known Secondary structure			T	T		S	S											S	S		S	S	S	S			T	T															T	T		T	T												S	S					T	T	T	S		T	T	S		B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	I	R	S	H	L	E	Q	T	N	A	D	E	A	L	V	L	D	S	E	G	W	V	T	E	C	C	A	A	N	L	F	W	R	K	G	N	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	Y	Q	L	V	E	V	Q	A	S	L	E	E	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	G	S	E	A	R	R	H	G	Y	Q	E	G	I	A	L	D	V	N	G	Y	I	S	E	G	A	G	E	N	L	F	E	V	K	D	G	V	L	F	T	P	P	F	T	S	S	A	L	P	G	I	T	R	D	A	I	I	K	L	A	K	E	L	G	I	E	V	R	E	Q	V	L	S	R	E	S	L	Y
Template Known Secondary structure											T	T		S							T	T	S	B					T	T	B							T	T							G	G	G	T																	T	T									B	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		Q	A	D	E	M	V	I	C	N	A	L	M	P	V	M	P	V	C	A	C	G	D	V	S	F	.	.	.	S	S	A	T	L	Y	E	Y	L	A	P	L	C	E	R	P
Query Conservation																											.	.	.
Alig confidence																											.	.	.
Template Conservation
Template Sequence		L	A	D	E	V	F	M	S	G	T	A	A	E	I	T	P	V	R	S	V	D	G	I	Q	V	G	E	G	R	C	G	P	V	T	K	R	I	Q	Q	A	F	F	G	L
Template Known Secondary structure				S							T	T	T									T	T				T	T	S	S														G	G
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions