Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 13 Aligned Residues 208 % Identity 22% Template c3qqmD_ PDB info PDB header:transferase Chain: D: PDB Molecule:mlr3007 protein; PDBTitle: crystal structure of a putative amino-acid aminotransferase2 (np_104211.1) from mesorhizobium loti at 2.30 a resolution Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	K	.	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	P	Q	L	E	Q	E	M	K	T	L	A	A	E	Q	Q	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N
Query Conservation																				.
Alig confidence																				.																																																								.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		G	D	T	A	D	F	E	L	I	E	T	X	R	W	Q	P	G	T	S	F	L	R	F	D	R	H	L	A	R	L	Y	G	S	A	A	E	L	G	F	A	C	D	P	Q	R	I	A	E	V	L	S	D	A	L	D	G	A	R	T	A	X	R	T	R	L	A	L	A	R	N	G	D	A	T	.	.	.	.	.	.
Template Known Secondary structure				S	S												T	T	T			T	T																T																	T	T			S										T	T	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	P	A	T	R	I	L	S	V	T	A	Y	P	A	H	Y	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	L	G	R	N	P	H	L	A	G	I	K	H	L	N	R	L	E	Q	V	L	I	R	S	H	L	E	Q	T	N	A	D	E	A	L	V	L	D	S	E	G	W	V	T	E	C	C	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.											.	.	.																			.
Template Conservation		.	.	.	.	.	.	.											.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	A	S	A	Q	P	Y	E	P	L	A	.	.	.	A	D	K	V	W	I	L	R	L	A	R	T	R	L	D	S	Q	N	.	T	L	L	R	H	T	S	R	R	Q	L	Y	T	H	A	R	S	E	Y	L	V	T	Q	A	D	E	V	L	L	A	N	E	R	G	E	I	C	E	G	T	I
Template Known Secondary structure		.	.	.	.	.	.	.											.	.	.	T	T									S					T	T		.	G	G	G	G														T	S		T	T	T		S							T	T	S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.											.	.	.																			.
Template SS confidence
									84	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		177	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	N	L	F	W	R	.	K	G	N	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	Y	Q	L	V	E	V	Q	A	S	L	E	E	S	L	Q	A	D	E	M	V	I	C	N	A	L	M	P	V	M	P	V	C	A	C
Query Conservation								.
Alig confidence								.																												.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		T	N	V	F	A	D	F	G	D	G	V	L	A	T	P	R	L	D	C	G	L	L	P	G	V	L	R	A	E	L	L	D	E	G	.	.	.	.	.	R	A	E	E	A	I	Y	S	Y	D	D	L	K	S	A	K	A	L	F	V	G	N	S	L	R	G	L	I	P	A	K	L	V
Template Known Secondary structure		S							S	S	S							G	G	G	T													T	T	.	.	.	.	.	S												T	T		S							T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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