Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 8 Aligned Residues 264 % Identity 18% Template c3dtfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:branched-chain amino acid aminotransferase; PDBTitle: structural analysis of mycobacterial branched chain aminotransferase-2 implications for inhibitor design Resolution 2.20 Å

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		3	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure							.	.	.	.																												.	.	.	.	.
Query SS confidence							.	.	.	.																												.	.	.	.	.
Query Sequence		L	I	N	G	H	.	.	.	.	K	Q	E	S	L	A	V	S	D	R	A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	.	.	.	.	.	K	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	P	Q	L	E	Q	E	M	K	T	L	A	A	E
Query Conservation							.	.	.	.																												.	.	.	.	.
Alig confidence							.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		W	H	N	A	Q	V	I	P	Y	G	P	I	Q	L	D	P	S	A	I	V	L	H	Y	G	Q	E	I	F	E	G	L	K	A	Y	R	W	A	D	G	S	I	V	S	F	R	P	E	A	N	A	A	R	L	Q	S	S	A	R	R	L	A	I	P	E	L	P	E	E	V	F	I	E	S	L	R	Q	L	I	A	V
Template Known Secondary structure										S							T	T		T																		T	T	S						S															T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		74											.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																																																				.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																																																																				.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	Q	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N	S	G	P	A	T	R	I	L	S	V	T	A	Y	P	A	H	Y	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	L	G	R	N	P	H	L	A	G	I	K	H	.	L
Query Conservation			.	.	.	.	.	.	.	.	.	.																																																																				.
Alig confidence			.	.	.	.	.	.	.	.	.	.																							.	.																																												.
Template Conservation																																			.	.
Template Sequence		D	E	K	W	V	P	P	A	G	G	E	E	S	L	Y	L	R	P	F	V	I	A	T	E	P	G	L	G	V	R	P	S	N	.	.	E	Y	R	Y	L	L	I	A	S	P	A	G	A	Y	F	K	G	G	I	K	P	V	S	V	W	L	S	H	E	Y	V	R	A	S	P	G	G	T	G	A	A	K	F	G	G
Template Known Secondary structure			G	G	G	S			T	T	S	S																	S		S			S	.	.														S	S	T	T	S										S	S			S			T	T	S	S	T	T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																									.	.																			.	.	.	.
Query SS confidence																									.	.																			.	.	.	.
Query Sequence		N	R	L	E	Q	V	L	I	R	S	H	L	E	Q	T	N	A	D	E	A	L	V	L	.	.	D	S	E	G	W	V	T	E	C	C	A	A	N	L	F	W	R	K	.	.	.	.	G	N	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	Y	Q	L
Query Conservation																									.	.																			.	.	.	.
Alig confidence																									.	.																			.	.	.	.
Template Conservation
Template Sequence		N	Y	A	A	S	L	L	A	Q	A	Q	A	A	E	M	G	C	D	Q	V	V	W	L	D	A	I	E	R	R	Y	V	E	E	M	G	G	M	N	L	F	F	V	F	G	S	G	G	S	A	R	L	V	T	P	E	L	S	G	S	L	L	P	G	I	T	R	D	S	L	L	Q	L	A	T	D	A	G	F	A	V
Template Known Secondary structure					T	T										T	T		S							T	T	T	S		B					T	T								S		G	G	G										S	S	S																T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																						.	.	.	.
Query SS confidence															.	.	.	.	.	.																						.	.	.	.
Query Sequence		V	E	V	Q	A	S	L	E	E	S	L	Q	A	.	.	.	.	.	.	D	E	M	V	I	C	N	A	L	M	P	V	M	P	V	C	A	C	G	D	V	.	.	.	.	S	F	S	S	A	T	L	Y	E	Y	L	A	P	L	C	E	R	P
Query Conservation															.	.	.	.	.	.																						.	.	.	.
Alig confidence															.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		E	E	R	K	I	D	V	D	E	W	Q	K	K	A	G	A	G	E	I	T	E	V	F	A	C	G	T	A	A	V	I	T	P	V	S	H	V	K	H	H	D	G	E	F	T	I	A	D	G	Q	P	G	E	I	T	M	A	L	R	D	T	L
Template Known Secondary structure							B										T	T										T	T	T											T	T						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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