Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 7 Aligned Residues 251 % Identity 22% Template c3cswB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative branched-chain-amino-acid aminotransferase; PDBTitle: crystal structure of a putative branched-chain amino acid2 aminotransferase (tm0831) from thermotoga maritima at 2.15 a3 resolution Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure									.	.	.	.																																																						.
Query SS confidence									.	.	.	.																																																						.
Query Sequence		M	F	L	I	N	G	H	.	.	.	.	K	Q	E	S	L	A	V	S	D	R	A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	K	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	.	P	Q	L	E	Q	E	M	K	T	L	A	A	E	Q	Q
Query Conservation									.	.	.	.																																																						.
Alig confidence									.	.	.	.																																																						.
Template Conservation
Template Sequence		L	I	W	W	R	G	K	F	R	R	A	D	E	I	S	L	D	F	S	L	F	E	K	S	L	Q	G	A	V	Y	E	T	L	R	T	Y	S	R	A	P	F	A	A	Y	K	H	Y	T	R	L	K	R	S	A	D	F	F	N	L	P	L	S	L	S	F	D	E	F	T	K	V	L	K	A	G	A	D	E	F	K
Template Known Secondary structure						T	T					S	S													T	T											T	T			T	T															T	T				S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.																																																								.
Query SS confidence		.																																																								.
Query Sequence		.	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N	S	G	P	A	T	R	I	L	S	V	T	A	Y	P	A	H	Y	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	L	.	G	R	N	P	H	L	A	G	I	K	H	L	N	R	L	E	Q	V	L	I	R	S	H
Query Conservation		.																																																								.
Alig confidence		.																	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.															.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Sequence		Q	E	V	R	I	K	V	Y	L	F	P	D	S	G	E	V	L	.	.	.	.	.	.	.	.	.	.	.	.	F	V	F	S	P	L	N	I	P	D	.	.	.	L	E	T	G	V	E	V	K	I	S	N	V	R	R	I	P	D	L	S	T	P	P	A	L	K	I	T	G	R	T	D	I	V	L	A	R	R	E
Template Known Secondary structure		S										T	T	T					.	.	.	.	.	.	.	.	.	.	.	.											.	.	.		T	T								S	S					T	T	T	S		T	T			B	T	T									T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.													.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	T	N	A	D	E	A	L	V	L	D	S	E	G	W	V	T	E	C	C	A	A	N	L	F	W	R	K	G	N	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	Y	Q	L	V	E	V	Q	A	S	L	E	E	S	L	Q	A	D	E	M	V
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		I	.	.	V	D	C	Y	D	V	I	L	L	G	L	N	G	Q	V	C	E	G	S	F	S	N	V	F	L	V	K	E	G	K	L	I	T	P	S	L	D	S	G	I	L	D	G	I	T	R	E	N	V	I	K	L	A	K	S	L	E	I	P	V	E	E	R	V	V	W	V	W	E	L	F	E	A	D	E	X	F
Template Known Secondary structure			.	.	S	S	S	S							T	T	S	B					S	S	S							T	T							G	G	G	T																	T	T									B								S
Template Predicted Secondary structure			.	.
Template SS confidence
		147			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		I	C	N	A	L	M	P	V	M	P	V	C	A	C	G	D	V	S	F	S	S	.	.	.	A	T	L	Y	E	Y	L	A	P	L	C	E	R	P
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		L	T	H	T	S	A	G	V	V	P	V	R	R	L	N	E	H	S	F	F	E	E	E	P	G	P	V	T	A	T	L	X	E	N	F	E	P	F
Template Known Secondary structure					T	T	T									T	T			S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions