Job Description P28305 Confidence 100.00% Date Thu Jan 5 11:44:41 GMT 2012 Rank 3 Aligned Residues 267 % Identity 22% Template c1wrvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:branched-chain amino acid aminotransferase; PDBTitle: crystal structure of t.th.hb8 branched-chain amino acid2 aminotransferase Resolution 1.50 Å

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		1	.	.	.	.	.	.					.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure									.	.	.	.																												.	.	.	.																											.
Query SS confidence									.	.	.	.																												.	.	.	.																											.
Query Sequence		M	F	L	I	N	G	H	.	.	.	.	K	Q	E	S	L	A	V	S	D	R	A	T	Q	F	G	D	G	C	F	T	T	A	R	V	I	D	G	.	.	.	.	K	V	S	L	L	S	A	H	I	Q	R	L	Q	D	A	C	Q	R	L	M	I	S	C	D	F	W	.	P	Q	L	E	Q	E	M	K	T	L	A
Query Conservation									.	.	.	.																												.	.	.	.																											.
Alig confidence									.	.	.	.																												.	.	.	.																											.
Template Conservation
Template Sequence		L	I	W	M	N	G	A	F	V	P	Q	E	E	A	K	T	S	V	L	S	H	A	L	H	Y	G	T	S	V	F	E	G	I	R	A	Y	E	T	A	K	G	P	A	I	F	R	L	K	E	H	V	K	R	F	Y	N	S	A	K	V	L	R	M	E	I	P	F	A	P	E	E	L	E	E	A	I	K	E	V	V
Template Known Secondary structure		S				T	T					G	G	G					T	T																				T	T						T																T					S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		72	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.
Predicted Secondary structure						.	.																																			.																															.	.
Query SS confidence						.	.																																			.																															.	.
Query Sequence		A	E	Q	Q	.	.	N	G	V	L	K	V	V	I	S	R	G	S	G	G	R	G	Y	S	T	L	N	S	G	P	A	T	R	I	L	S	V	T	A	Y	.	P	A	H	Y	D	R	L	R	N	E	G	I	T	L	A	L	S	P	V	R	L	G	R	N	P	H	L	A	G	I	.	.	K	H	L	N	R	L	E
Query Conservation						.	.																																			.																															.	.
Alig confidence						.	.																																			.																															.	.
Template Conservation
Template Sequence		R	R	N	G	Y	R	S	C	Y	I	R	P	L	A	W	M	G	A	K	A	L	G	V	N	P	L	P	N	N	P	A	E	V	M	V	A	A	W	E	W	G	A	Y	L	G	E	E	A	V	R	K	G	A	R	L	I	T	S	S	W	A	R	F	P	A	N	V	M	P	G	K	A	K	V	G	G	N	Y	V	N
Template Known Secondary structure				T	T		S	S											S	S			S	S			G	G	G		S											S																		S	S		B			T	T	T	S		T	T	S		B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	L	I	R	S	H	L	E	Q	T	N	A	D	E	A	L	V	L	D	S	E	G	W	V	T	E	C	C	A	A	N	L	F	W	R	K	G	N	V	V	Y	T	P	R	L	D	Q	A	G	V	N	G	I	M	R	Q	F	C	I	R	L	L	A	Q	S	S	Y	Q	L	V	E	V	Q	A	S	L	E	E	S
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		S	A	L	A	K	M	E	A	V	A	A	G	A	D	E	A	L	L	L	D	E	E	G	Y	V	A	E	G	S	G	E	N	L	F	F	V	R	D	G	V	I	Y	A	L	E	H	S	.	V	N	L	E	G	I	T	R	D	S	V	I	R	I	A	K	D	L	G	Y	E	V	Q	V	V	R	A	T	R	D	Q	L
Template Known Secondary structure												T	T		S						B	T	T	S	S					S	S								T	T								T	.	T	S																T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		L	Q	A	D	E	M	V	I	C	N	A	L	M	P	V	M	P	V	C	A	C	G	D	V	S	F	.	.	.	S	S	A	T	L	Y	E	Y	L	A	P	L	C	E	R	P
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		Y	M	A	D	E	V	F	M	T	G	T	A	A	E	V	T	P	V	S	M	I	D	W	R	P	I	G	K	G	T	A	G	P	V	A	L	R	L	R	E	V	Y	L	E	A
Template Known Secondary structure			T		S							T	T	T									T	T				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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