Job Description P0AG99 Confidence 3.49% Date Thu Jan 5 11:28:32 GMT 2012 Rank 22 Aligned Residues 83 % Identity 12% Template c1qleB_ PDB info PDB header:oxidoreductase/immune system Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment Resolution 3.0 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	E	A	L	L	V	V	F	L	I	V	A	I	G	L	V	G	L	I	M	L	Q	Q	G	K	G	A	D	M	G	A	S	F	G	A	G	A	S	A	T	L	F	G	S	S	G	S	G	N	F	M	T	R	M	T	A	L	L	A	T	L	F	F	I	I	S	L	V	L	G	N	I	N	S	N	K	T	N	K
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.
Template Sequence		V	L	Y	I	I	T	A	V	T	I	F	V	C	L	L	L	L	I	C	I	V	R	F	N	R	R	A	N	P	.	.	.	.	.	.	.	.	V	P	A	R	F	T	H	N	T	P	I	E	V	I	W	T	L	V	P	V	L	I	L	V	A	I	G	A	F	S	L	P	I	L	F	R	S	Q	E	M	P	N	D
Template Known Secondary structure																								S	S	T	T	T		S	.	.	.	.	.	.	.	.	S																																						S			S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	W	E	N	L	S	A	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	L	V	I	K	A	I	G	H	Q
Template Known Secondary structure			S							B		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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