Job Description P0AFT2 Confidence 99.95% Date Thu Jan 5 11:27:12 GMT 2012 Rank 5 Aligned Residues 203 % Identity 15% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		E	S	I	Q	L	V	I	D	S	L	P	F	.	.	.	.	L	L	K	G	A	G	Y	T	L	Q	L	S	I	G	G	M	F	F	G	L	L	L	G	F	I	L	A	L	M	R	L	S	P	I	W	P	V	R	W	L	A	R	F	Y	I	S	I	F	R	G	T	P	L	I	A	Q	L	F	M	I	Y	Y	G	L
Query Conservation														.	.	.	.
Alig confidence											.			.	.	.	.
Template Conservation											.
Template Sequence		K	N	F	T	R	V	F	T	D	.	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F
Template Known Secondary structure		T	T	T	S	G	G	G	T		.	T	T	T	S	T	T																															T		S	S	S	T	T								T	T					S													T
Template Predicted Secondary structure											.
Template SS confidence
		262	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		79																				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	G	I	E	L	D	P	I	P	S	A	M	I	G	L	S	L	N	T	A	A	Y	A	A	E	T	L	R	A	A	I	S	S	I	D	K	G	Q	W	E	A	A	A	S	I	G	M	T	P	W	Q	T	M	R	R	A	I	L	P
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P
Template Known Secondary structure			S	S	S	S									T	S	S					T	T	T	S																												G	G	G	S		T									T				S							T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.															.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		Q	A	A	R	V	A	L	P	P	L	S	N	S	F	I	S	L	V	K	D	T	S	L	A	A	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	P	E	L	F	R	Q	A	Q	L	I	T	S	R	T	L	E	.	.	.	V	F	T	M	Y	L	A	A	S	L	I	Y	W	I	M	A	T	V
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A
Template Known Secondary structure		G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		203	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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