Job Description P0AFT2 Confidence 3.91% Date Thu Jan 5 11:27:12 GMT 2012 Rank 27 Aligned Residues 90 % Identity 16% Template c2bg9B_ PDB info PDB header:ion channel/receptor Chain: B: PDB Molecule:acetylcholine receptor protein, beta chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		M	R	R	A	I	L	P	Q	A	A	R	V	A	L	P	P	L	S	N	S	F	I	S	.	.	.	.	.	.	L	V	K	D	T	S	L	A	A	T	I	Q	V	P	E	L	F	R	Q	A	Q	L	I	T	S	R	T	L	E	V	F	T	M	Y	L	A	A	S	L	I	Y	W	I	M	A	T	V	L	S	T	L
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	Y	T	I	V	P	C	I	L	I	S	I	L	A	I	L	V	F	Y	L	P	P	D	A	G	E	K	M	S	L	S	I	S	A	L	L	A	L	T	V	F	L	L	L	L	A	D	K	V	P	E	T	S	L	S	V	P	I	I	I	S	Y	L	M	F	I	M	I	L	V	A	F	S	V	I	L	S	V	V
Template Known Secondary structure																						S	T	T	T		T	T																												T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	H	F	E	N	Q	L	N	R	Q	E	R	E	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	N	L	H	H	R	S	P	N	T	H	E	A	V	E
Template Known Secondary structure								T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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