Job Description P0AFT2 Confidence 1.32% Date Thu Jan 5 11:27:12 GMT 2012 Rank 90 Aligned Residues 95 % Identity 12% Template c2bg9A_ PDB info PDB header:ion channel/receptor Chain: A: PDB Molecule:acetylcholine receptor protein, alpha chain; PDBTitle: refined structure of the nicotinic acetylcholine receptor2 at 4a resolution. Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		T	P	W	Q	T	M	R	R	A	I	L	P	Q	A	A	R	V	A	L	P	P	L	S	N	S	F	I	.	.	.	.	.	.	S	L	V	K	D	T	S	L	A	A	T	I	Q	V	P	E	L	F	R	Q	A	Q	L	I	T	S	R	T	L	E	V	F	T	M	Y	L	A	A	S	L	I	Y	W	I	M	A	T
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	L	Y	F	V	V	N	V	I	I	P	C	L	L	F	S	F	L	T	V	L	V	F	Y	L	P	T	D	S	G	E	K	M	T	L	S	I	S	V	L	L	S	L	T	V	F	L	L	V	I	V	E	L	I	P	S	T	S	S	A	V	P	L	I	G	K	Y	M	L	F	T	M	I	F	V	I	S	S	I
Template Known Secondary structure				T																												G	G	G																													S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	T	L	Q	N	H	F	E	N	Q	L	N	R	Q	E	R	E	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	T	V	V	V	I	N	T	H	H	R	S	P	S	T	H	S	A	I	E
Template Known Secondary structure														S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions