Return to main results Retrieve Phyre Job Id

Job DescriptionP58035
Confidence98.59%DateThu Jan 5 12:06:33 GMT 2012
Rank7Aligned Residues89
% Identity22%Templatec2l2qA_
PDB info PDB header:transferaseChain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela); PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.... .....70..
Predicted Secondary structure 






















..........

Query SS confidence 





























































. . . . . . . . . .







Query Sequence  KILVACGTGMSTSTMIAHKLQEFLTEQGISATTAQCCLNEIPLNCNGMDLIVTSMRTNSDYG. . . . . . . . . . IPTLNGAA
Query Conservation 





  
 


  
   
        
                   
 



        .......... 


 
 
Alig confidence 












.















































..........







Template Conservation 



 
  




. 

 

   
   
    
 
             








 
             


 

  
Template Sequence  NILLVCGAGMSTS. MLVQRIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINT
Template Known Secondary structure  SSSS
SS
.T
S
STTTTT
S
S

SST



Template Predicted Secondary structure 




.










Template SS confidence 















































































   6...10........ .20.........30.........40.........50.........60.........70.........80....
 
   73... ...80.........90..
Predicted Secondary structure 



.



Query SS confidence 



.















Query Sequence  LLTG. INDDALKQQIKALLTQ
Query Conservation   

 .         
   
  
Alig confidence 



.















Template Conservation    

 


  

  
  

  
Template Sequence  IDYGTMNGEKVLQLAINAFNN
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 




















   85....90.........100.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions