Return to main results Retrieve Phyre Job Id

Job DescriptionP58035
Confidence32.86%DateThu Jan 5 12:06:33 GMT 2012
Rank111Aligned Residues77
% Identity13%Templatec2i2aA_
PDB info PDB header:transferaseChain: A: PDB Molecule:probable inorganic polyphosphate/atp-nad kinase 1; PDBTitle: crystal structure of lmnadk1 from listeria monocytogenes
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50....... ..60... ......
Predicted Secondary structure 
















..........





.


Query SS confidence 
























































. . . . . . . . . .





.





Query Sequence  MKKILVACGTGMSTSTMIAHKLQEFLTEQGISATTAQCCLNEIPLNCNGMDLIVTSM. . . . . . . . . . RTNSDY. GIPTLN
Query Conservation 







  
 


  
   
        
                   
 



 ..........      .  


 
Alig confidence 

..



























............












..........





.





Template Conservation 

..  
       
  
       
      ............      
 








 
 
          




Template Sequence  MK. . YMITSKGDEKSDLLRLNMIAGFGEYDME. . . . . . . . . . . . YDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIG
Template Known Secondary structure 
..

STTSS
............
SSS
SSTTTSGGG
Template Predicted Secondary structure 
..





............














Template SS confidence 















































































   1. .......10.........20.........30 .........40.........50.........60......
 
   70. ........80.........90.
Predicted Secondary structure  ....






Query SS confidence 

. . . .



















Query Sequence  GA. . . . ALLTGINDDALKQQIKALLT
Query Conservation 
 ....
 

          
   
 
Alig confidence 

....



















Template Conservation 

 
 



           
     
Template Sequence  IHTGHLGFYADWRPAEADKLVKLLAK
Template Known Secondary structure  SSS

SS



GGG
Template Predicted Secondary structure 











Template SS confidence 

























   67..70.........80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions