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Job DescriptionP75785
Confidence98.86%DateThu Jan 5 12:14:07 GMT 2012
Rank29Aligned Residues256
% Identity16%Templatec2x98A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alkaline phosphatase; PDBTitle: h.salinarum alkaline phosphatase
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230....... ..240.........250.........260 .........270.
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Query Sequence  KPKYQTYVVVIGESARRDALGAFGG. . . . . . . . . . . . . . . . HWDNTPFASSVNGLIFADYIAAS. . . . . GSTQKSLGLTL
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Template Sequence  ASPAANAIAYIVDGMGQTQISAARYLNAYKTAPERFPLNVSPAETPTGFDAFSSRGSMTTFPDDPYETTTDSAAAATAFA
Template Known Secondary structure 

S
S


TTTTTGGGSTTTS

TGGGSS




SS
SS

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   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   272.......280.. .......290.........300.....
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Query Sequence  NRVVDGKPQFQ. . . . . . . . . . . . DNFVTLANRAGFQTWWFSNQGQI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SGVKTYNGAIGGVQTSGGGFQRVDTVLERASAQGYATGLITTTEATHATPAAFAAHVEDRGNQTEIARQYIEETQPDVIL
Template Known Secondary structure  S



TT
BSTTT


T
TTS

BSSTT
TT

S
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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   306...310.........320.........330.........340........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQV
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Template Sequence  GGQRRDFEADASNGGTLVDAARDNGYTIAETAAELDAVDDPPVLGLFSQESHLDYYLDRKNDPENTQPNLDAMVDAGVDL
Template Known Secondary structure 
GGGGGSB
SSSSBTT

S

SS


SSS




TT




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   204.....210.........220.........230.........240.........250.........260.........270.........280...
 
   349350. ........360.........370.........380.........390.........400.........410.........420...
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Query Sequence  LAQ. . EHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYFSDH. . .
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Template Sequence  LSSAGDPDKGFFLLV. . . . . . . . . . . . ESGRVDHAGHANYPAQVA. EQYEATQVAGQLVEYAETTAEPTFLVSTGDHECG
Template Known Secondary structure 

SS
SS

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ST
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   284.....290........ .300.........310...... ...320.........330.........340.........350
 
   424.....430....... ..
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Query Sequence  GLAFKERGKDVQYL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AH
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Template Sequence  GLTLGRDSPYEVEYDVLAAQKATTSRLRDLLAGVRSADELESIVAAHTGITALTDREVAKLRDAPGSISTILAERAGIAF
Template Known Secondary structure 

BSS
SS
S




S
TT


SS





GGGT
B
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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   440.........450.........460.........470.........480....
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Query Sequence  DDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQWTGIK
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Template Sequence  TTDGHTGTDVPVFAHGPNAAR. . . FDAARDNTAVADALAAALGVS
Template Known Secondary structure 

SS


STTGGG...GSSTTT

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   431........440.........450. ........460.........470..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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