 |
Job Description | P26648 | Confidence | 99.86% | Date | Thu Jan 5 11:43:06 GMT 2012 |
Rank | 73 | Aligned Residues | 96 |
% Identity | 15% | Template | d1kcwa2 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 3.00 |
|
 |
  |   |
359 | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | |
|
|
|
. | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | D | D | P | G | I | N | G | Q | L | W | D | V | N | R | I | D | V | T | A | Q | Q | G | T | W | E | R | W | T | V | R | A | . |
. |
. |
. |
D | E | P | Q | A | F | H | I | E | G | V | M | F | Q | I | R | N | V | N | G | A | M | P | F | P | E | D | R | G | W | K | D | T | V | W | V | D | G | Q | V | E | L | L | V |
Query Conservation |   |
  |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
| . | . | . | . |   |   |   |
|
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|   |   |   |   | . |   |   |
|   |
|   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
Template Sequence |   |
N | R | M | Y | S | V | N | G | Y | T | F | G | . |
S | L | P | G | L | S | M | C | A | E | D | R | V | K | W | Y | L | F | G | M | G | N | E | V | D | V | H | A | A | F | F | H | G | Q | A | L | T | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | Y | R | I | D | T | I | N | L | F | P | A | T | L | F | D | A |
Template Known Secondary structure |   |
T |  |  |  |  | S | S | S |
|
| S | S | . |
|
|
|
|
|  |  |  | T | T |  |  |  |  |  |  |  |  |
|
|
| S | T | T |
|
|  |  |  |  |  | T | T | S |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | S | S | S |
|
| S |  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
  |
  |   |
435 | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | F | G | Q | P | S | W | A | H | F | P | F | Y | F | N | S | Q | T | L | E | M | A | D | R | G | S | I | G | Q | L | L | V | N | P |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   | . | . |   |   |   |
|
|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
Template Sequence |   |
Y | M | V | A | Q | N | P | G | E | . |
. |
W | M | L | S | C | Q | N | L | N | H | L | K | A | G | L | Q | A | F | F | Q | V | Q | E |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|  |  | . | . |  |  |  |  |  |
|
|  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  | . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
306 | . | . | . | 310 | . | . | . | . | |
|
. | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|