 |
Job Description | P26648 | Confidence | 98.80% | Date | Thu Jan 5 11:43:06 GMT 2012 |
Rank | 90 | Aligned Residues | 98 |
% Identity | 10% | Template | d1jzga_ |
SCOP info | Cupredoxin-like
| Cupredoxins
| Plastocyanin/azurin-like
|
Resolution | 1.40 |
|
 |
  |   |
369 | 370 | . | . | . | . | . | . | . | . | |
. | 380 | . | . | . | . | . | . | . | . | . | 390 | |
|
. | . | . | . | . | . | . | . | . | 400 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | D | V | N | R | I | D | V | T | A | . |
Q | Q | G | T | W | E | R | W | T | V | R | A | . |
. |
D | E | P | Q | A | F | H | I | E | G | V | M | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | I | R | N | V | N | G | A | M | P | F | P | E | D | R | G | W | K | D | T | V | W | V | D | G | Q | V | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   | . |   |   |
|   |   |   |   |
|   |
|   |
| . | . |   |   |   |
|
|   |
|
|
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|
Template Sequence |   |
M | Q | F | N | T | N | A | I | T | V | D | K | S | C | K | Q | F | T | V | N | L | S | H | P | G | N | L | P | K | N | V | M | G | H | N | W | V | L | S | T | A | A | D | M | Q | G | V | V | T | D | G | M | A | S | G | L | D | K | D | Y | L | K | P | D | D | S | R | V | I | A | H | T | K | L | I | G | S | G | E | K |
Template Known Secondary structure |   |
S |
| B | S |
| S |  |  |  |  |
| T | T |
| S |  |  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |
| B |
|
|  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | T | T | S |
| T | T |
| T | T |
|
|  |  |
|
|
| B |
| T | T |
|  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
432 | . | . | . | . | . | . | . | 440 | |
. | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | V | Y | F | G | Q | P | S | . |
W | A | H | F | P | F | Y | F | N | S | Q | T | L | E | M | A | D | R | G | S | I | G | Q | L | L | V | N |
Query Conservation |   |
  |   |
|   |
|   |   |   |   | . |   |   |   |
|   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|   | . |
|
|
|   |
|   |
|   |
|   |
Template Sequence |   |
D | S | V | T | F | D | V | S | K | L | K | E | G | E | Q | Y | M | F | F | C | T | F | P | G | H | S | . |
A | L | M | K | G | T | L | T | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | G | G | G |
|
| T | T |
|
|  |  |  |  |
|
| S | T | T | G | G | . | G | T | S |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|