Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 12 Aligned Residues 408 % Identity 21% Template c3ppsD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:laccase; PDBTitle: crystal structure of an ascomycete fungal laccase from thielavia2 arenaria Resolution 2.50 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.				.
Predicted Secondary structure																		.						.																														.															.	.								.	.	.
Query SS confidence																		.						.																														.															.	.								.	.	.
Query Sequence		Q	P	L	F	M	T	V	Q	R	A	H	W	S	F	T	P	.	G	T	R	A	S	.	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	.	T	E	N	V	S	M	T	V	A	G	L	Q	V	P	.	.	G	P	L	M	G	G	P	.	.	.	A
Query Conservation																		.						.																														.															.	.								.	.	.
Alig confidence																		.						.																														.															.	.								.	.	.
Template Conservation
Template Sequence		V	A	Y	Q	L	T	L	T	E	K	E	N	W	I	G	P	D	G	V	L	K	N	V	V	M	L	V	N	D	K	I	I	G	P	T	I	R	A	N	W	G	D	N	I	E	V	T	V	I	N	N	L	K	T	N	G	T	S	M	H	W	H	G	L	R	Q	L	G	N	V	F	N	D	G	A	N	G	V	T	E
Template Known Secondary structure																	T	T	S										T	T	B	S	S								T	T												S	S									T				T	T		G	G	G	S			B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		118	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	M	M	S	P	.	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D	D	F	P	V	I	I	Q	D	K	R	L	D	N	F	G	T
Query Conservation							.
Alig confidence							.													.										.	.	.	.																										.	.	.	.	.	.
Template Conservation																				.										.	.	.	.																										.	.	.	.	.	.
Template Sequence		C	P	I	P	P	K	G	G	R	K	T	Y	K	F	R	A	T	Q	.	Y	G	T	S	W	Y	H	S	H	.	.	.	.	F	S	A	Q	Y	G	N	G	V	V	G	T	I	Q	I	D	G	P	A	S	L	P	Y	D	I	.	.	.	.	.	.	D	L	G	V	F	P	L	M	D	Y	Y	Y	R	S	A	D	E
Template Known Secondary structure						S	T	T												.										.	.	.	.	S	T	T	G	G	G	G	T												S	S			S		.	.	.	.	.	.												S	S
Template Predicted Secondary structure																				.										.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.												.
Query SS confidence																							.	.	.	.	.	.	.	.	.												.
Query Sequence		P	E	Y	N	E	P	G	S	G	G	F	V	G	D	T	L	L	V	N	G	V	.	.	.	.	.	.	.	.	.	Q	S	P	Y	V	E	V	S	R	G	W	.	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G	R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V
Query Conservation																							.	.	.	.	.	.	.	.	.												.
Alig confidence																							.	.	.	.	.	.	.	.	.												.																			.																	.
Template Conservation																																																														.																	.
Template Sequence		L	V	H	F	T	Q	S	N	G	A	P	P	S	D	N	V	L	F	N	G	T	A	R	H	P	E	T	G	A	G	Q	W	Y	N	V	T	L	T	P	G	K	R	H	R	L	R	I	I	N	T	S	T	D	N	H	F	Q	V	S	L	.	V	G	H	N	M	T	V	I	A	T	D	M	V	P	V	N	.	A	F
Template Known Secondary structure							T	T	S					B	S					S	S			B		T	T	T			B									T	T												S	S								.	T	T	B								T	T					.
Template Predicted Secondary structure																																																														.																	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.											.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	Q	L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C	G	E	A	A	S	I	V	D	R	I	R	G	F	F	E	P	.	.	.	.	.	.	.	.	.	.	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	S	S	L	F	L	A	V	G	Q	R	Y	D	V	T	I	D	A	N	S	P	V	G	N	Y	W	F	N	V	T	F	G	D	G	L	C	G	S	S	N	N	K	F	P	A	A	I	F	R	Y	Q	G	A	P	A	T	L	P	T	D	Q	G	L	P	V	P	N	H	M	C	L	D	N	L	N	L	T	P	V
Template Known Secondary structure				S						T	T											S		S	S									S	S	G	G	G			B	S		S	S								T	T			S														T	T								B	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.	.	.	.																					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																											.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	M	R	L	L	P	T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D	D	.	.	.	.	.	.	P	G	I	N	G	Q	L	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	N	R	I	D	V	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A
Query Conservation																											.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	R	S	A	P	V	N	N	F	V	K	R	P	S	N	T	L	G	V	T	L	D	I	G	G	T	P	L	F	V	W	K	V	N	G	S	A	I	N	V	D	W	G	K	P	I	L	D	Y	V	M	S	G	N	T	S	Y	P	V	S	D	N	I	V	Q	V	D	A	V	D	Q	W	T	Y	W	L	I	E	N
Template Known Secondary structure		S			B				T	T					G	G	G									S	S	S	S	S						T	T	B						S	S	S							T	S	S						G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
									391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.																			.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	E	P	Q	A	F	H	I	E	G	V	M	F	Q	I	R	N	V	N	G	A	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	P	E	D	R	G	W	K	D	T	V	W	V	D	G	Q	V	E	L	L	V	Y	F	G	Q	P	S	W	A	H	F	P
Query Conservation		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Template Conservation																																																																															.	.
Template Sequence		D	P	T	N	P	I	V	S	L	P	H	P	M	H	L	H	G	H	D	F	L	V	L	G	R	S	P	D	E	L	P	S	A	G	V	R	H	I	F	D	P	A	K	D	L	P	R	L	K	G	N	N	P	V	R	R	D	V	T	M	L	P	A	G	G	W	L	L	L	A	F	K	T	D	N	P	G	.	.	A
Template Known Secondary structure			T	T		S	S										S	S									S					G	G	G												T	T	T				B	S					S						T	T	S										S			.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.
		446	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	F	H	C	H	I	A	W	H	V	S	G	G	L	S	V	D	F	L	E	R	P
Template Known Secondary structure								S							T
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.