Return to main results Retrieve Phyre Job Id

Job DescriptionP26648
Confidence20.81%DateThu Jan 5 11:43:06 GMT 2012
Rank169Aligned Residues15
% Identity33%Templatec3jqoV_
PDB info PDB header:transport proteinChain: V: PDB Molecule:traf protein; PDBTitle: crystal structure of the outer membrane complex of a type iv2 secretion system
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.
Predicted Secondary structure 



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Query Sequence  PTIRVWKGDDVKLIY
Query Conservation 
 


  

 
 
  
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Template Conservation 


 
  
  
 
 
Template Sequence  PTLYDQQGDAVSIFV
Template Known Secondary structure 

TT

Template Predicted Secondary structure 




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   357..360.........370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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