Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 14 Aligned Residues 401 % Identity 27% Template c3aw5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:multicopper oxidase; PDBTitle: structure of a multicopper oxidase from the hyperthermophilic archaeon2 pyrobaculum aerophilum Resolution 2.00 Å

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		63	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		T	R	A	S	V	W	G	I	.	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	E	N	V	S	M	T	V	A	G	L	Q	V	P	G	P	L	M	G	G	P	A	R	M	M	S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		I	E	A	T	A	S	G	Y	M	A	E	G	V	L	N	P	T	I	I	L	R	R	G	Q	R	V	D	M	T	L	K	N	K	L	T	E	P	T	I	V	H	W	H	G	F	D	V	N	W	H	N	D	A	H	P	S	F	A	I	T	P	G	E	S	Y	N	Y	S	F	D	V	V	N	R	A	G	T	Y	L	Y
Template Known Secondary structure						T	T					T	T			S							T	T											S	S	S		B						T									T		G	G	G		B		T	T											S		S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D	D	F	P	V	I	I	Q	D	K	R	L	D	N	F	G	T	P	E	Y	N	E	P	G	.	.	S	G	G	F	V	G	D	T	L	L	V	N	G	V	Q	S
Query Conservation																																																																.	.
Alig confidence																														.	.	.																																.	.
Template Conservation																														.	.	.
Template Sequence		H	P	H	P	H	G	L	T	A	K	Q	F	Y	M	G	Q	L	G	L	V	I	V	E	D	S	G	S	D	.	.	.	L	G	F	K	Y	G	V	N	D	L	P	L	V	I	S	D	R	R	F	I	G	G	A	P	V	Y	N	P	T	P	M	E	M	I	A	G	F	L	G	N	A	V	L	V	N	G	V	K	D
Template Known Secondary structure						T	T	T							T	T										T	T	T	T	.	.	.	T	T			B	T	T	T													T	T																		S					T	T			T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		P	Y	V	E	V	S	R	G	W	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G	R	.	.	.	.	.	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K	Q	L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T
Query Conservation																																	.	.	.	.	.
Alig confidence																													.				.	.	.	.	.
Template Conservation																													.
Template Sequence		A	V	F	K	L	S	G	G	S	Y	R	L	R	L	V	N	G	S	N	A	R	L	Y	M	L	S	I	.	V	K	K	N	G	D	V	V	P	M	R	L	I	A	V	D	Q	G	F	L	A	R	P	I	E	V	R	A	L	F	L	A	P	A	E	R	A	E	V	V	V	E	L	G	E	G	V	Y	L	L	K	N
Template Known Secondary structure																			S	S	S								.			T	T	S											T	T										S						T	T											S
Template Predicted Secondary structure																													.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	E	A	A	S	I	V	D	R	I	R	G	F	F	E	P	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L	P	M	R	L	L	P	T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D	D	P	G	I	N	G	Q	L	W	D	V	N	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	F	D	P	M	H	L	E	M	G	H	G	M	Q	E	A	L	P	E	G	S	E	Y	T	I	A	T	F	L	V	E	G	K	G	E	A	V	P	V	E	A	L	S	D	P	P	P	E	P	P	K	P	T	R	T	R	R	F	A	L	S	L	S	G	M	Q	W	T	I	N	G	M	F	W	N	A	S	N	P
Template Known Secondary structure										T	T	S	S					S	S		T	T	S																						S										S											T	T					T	T	B				T	T		T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		375	.		.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.													.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure				.															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	.	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A	.	.	.	D	E	P	Q	A	F	H	I	E	G	V	M	F	Q	I	R	N	V	N	G	A	M	P	F	P	.	.	.	.	.	.	.	.	.	.	.	.	E	D	R	G	W	K	D	T	V	W	V	D	G	Q	V	E	L	L	V	Y	F	G	Q
Query Conservation				.															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	E	H	V	S	V	E	G	V	E	L	W	E	I	V	N	D	K	A	S	M	P	H	P	M	H	L	H	G	F	P	M	W	I	I	E	R	K	D	S	P	R	Q	V	A	E	L	A	V	D	N	R	G	R	L	P	T	D	L	G	L	K	D	T	V	L	I	W	P	G	E	T	V	K	I	V	V	N	F
Template Known Secondary structure		T																		S	S	S								S	S	S		B							S							T	T			S	T	T				G	G	G	G	S		B	S						T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
		439	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		P	S	W	A	H	F	.	P	F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		D	A	K	K	R	G	Q	L	F	P	F	H	C	H	N	L	E	H	E	D	G	G	M	M	I	N	I	A	V	K
Template Known Secondary structure			G	G	G	T	T								S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.