Return to main results Retrieve Phyre Job Id

Job DescriptionP26648
Confidence100.00%DateThu Jan 5 11:43:06 GMT 2012
Rank4Aligned Residues431
% Identity33%Templatec2yxwB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:blue copper oxidase cueo; PDBTitle: the deletion mutant of multicopper oxidase cueo
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  QQPLPVPPLLESRRGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPG
Query Conservation        
            
           
        

  


 


  

 
 
   
 
   
 

 


    
Alig confidence 




























.

















































Template Conservation 
  
  
            
         . 
        

  




 
  

 
 
 
 
 
   



 


    
Template Sequence  RPTLPIPDLLTTDARNRIQLTIGAGQSTF. GGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG
Template Known Secondary structure 

B







TTS.TTSSSSB

TT

SSS
B

T



Template Predicted Secondary structure 












.




















Template SS confidence 















































































   31........40.........50......... 60.........70.........80.........90.........100.........
 
   111........120.........130.........140.........150.........160.........170.........180.........190
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  PLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKR
Query Conservation    

     
 

 
  
 
     






 
    
  
   

 
 


          
      
  
 
 
  
Alig confidence 















































































Template Conservation    


 
  
 

 
 

        

 


 
    
  
   

 
 


                 
  
 
 
  
Template Sequence  EVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKK
Template Known Secondary structure 

TTS
B
TT


S
S


TTTTT


TS




BTTT
Template Predicted Secondary structure 











































Template SS confidence 















































































   110.........120.........130.........140.........150.........160.........170.........180.........
 
   191........200... ......210.........220.........230.........240.........250.........260.......
Predicted Secondary structure 









...
































Query SS confidence 












. . .































































Query Sequence  LDNFGTPEYNEPG. . . SGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVS
Query Conservation      
        ...  
  
   



   
   
  
  







      
 
 

    


 

  
  
  
Alig confidence 












...































































Template Conservation                            


   
     
   





          
       


 

     
  
Template Sequence  FSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVK
Template Known Secondary structure  B
TTSSB








STTBSS


SS

TT


TT
Template Predicted Secondary structure 
















































Template SS confidence 















































































   190.........200.........210.........220.........230.........240.........250.........260.........
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  VKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMA
Query Conservation     
 
 



 



                                                                
Alig confidence 

























































....

















Template Conservation 
  
 
 



 



                                          ....   
              
Template Sequence  VSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISAS. . . . GALPDTLSSLPALPSLEG
Template Known Secondary structure  S

TT

TT




SSTTTTSTTSSS


....



S










TT
Template Predicted Secondary structure 
































....

















Template SS confidence 















































































   270.........280.........290.........300.........310.........320....... ..330.........340.....
 
   348.350.........360.........370.........380.........390 .........400.........410.........420....
Predicted Secondary structure 




















...


















Query SS confidence 










































. . .

































Query Sequence  GSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRA. . . DEPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTV
Query Conservation                  


              
    
 
 
...   

 



  
 

   
          



Alig confidence 










































...

































Template Conservation                  


              
  
   
 
      






  
 

              



Template Sequence  LTVRKLQLSMDGGANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTV
Template Known Secondary structure 
TTTTB


TTS
SBT


TT



TT

BBTTB


GGGSSSBS
Template Predicted Secondary structure 









































Template SS confidence 















































































   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   425.... 430.........440.........450.........460......
Predicted Secondary structure 


.












Query SS confidence 




.




































Query Sequence  WVDGQ. VELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLV
Query Conservation   
   .    
 
       
 
  




 
 
 


    
Alig confidence 




.




































Template Conservation   
 

     


 
 


 
 
  



  
   

     
Template Sequence  KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV
Template Known Secondary structure  SSS
B
S
B
GGG
SSTT
Template Predicted Secondary structure 













Template SS confidence 










































   474.....480.........490.........500.........510......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions