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Job DescriptionP26648
Confidence100.00%DateThu Jan 5 11:43:06 GMT 2012
Rank9Aligned Residues411
% Identity19%Templatec1zpuE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:iron transport multicopper oxidase fet3; PDBTitle: crystal structure of fet3p, a multicopper oxidase that functions in2 iron import
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90..... ....100........ .110...... .
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Query Sequence  RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRL. TENVSMTVAGLQV. . PGPLMGGP. . . A
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Template Sequence  ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ
Template Known Secondary structure 

SSSS

TTBSS


TT



SS

B

T


TT
GGGS

BTTTB
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   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  RMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTP
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Template Sequence  CPIAPGSTMLYNFTVDYNVGTYWYHSH. . . . TDGQYEDGMKGLFIIKDDSFPYDY. . . . . . DEELSLSLSEWYHDLVTDL
Template Known Secondary structure 

B
TT

SS



....SSSGGGGT

TT

S

......S
SS
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   102.......110.........120........ .130.........140.........150.. .......160.........170.
 
   198.200.........210.........220........ .230.........240.........250.........260.........270.
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Query Sequence  . . . . . EYNEPGSGGFVGDTLLVNGVQSPYVEVSRGW. VRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQL
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Template Sequence  TKSFMSVYNPTGAEPIPQNLIVNNTMNLTWEVQPDTTYLLRIVNVGGFVSQYFWI. EDHEMTVVEIDGITTE. KNVTDML
Template Known Secondary structure  SSTT
TT





STTBSS


SS


SS

.TTB
TT.S
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   172.......180.........190.........200.........210.........220...... ...230.........240.. .......
 
   272.......280.........290 .........300.........310.........320.... .....330.........340....
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Query Sequence  SLAPGERREILVDMSNGDE. . VSITCGEAASIVDRIRGFFEPSSILVSTLVLTLR. . . . . PTGLLPLVTDSLPMRLLPTE
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Template Sequence  YITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKE
Template Known Secondary structure 
TT


S
SS


GGGSSS

TT


S
TTS







S
SS
S

GGG

BSS

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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   345....350.........360. ........370.... .....380.........390
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Query Sequence  IMAGSPIRSRDISLGDD. . . . . . . . PGINGQLWDVNRI. . . . . . . . . . . . . . . . . . . . . . . . DVTAQQGTWERWTVRA. .
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Template Sequence  AIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD
Template Known Secondary structure 



S
S
TTS
TTB




SS
TTSGGGTT
GGGG
SSS

TT

S
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   330.........340.........350.........360.........370.........380.........390.........400.........
 
   391........400.........410..... ....420.........430.........440.........450...
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Query Sequence  DEPQAFHIEGVMFQIRNVNGAMPFP. . . . . . . . . . . . . . . . . EDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTL
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Template Sequence  TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKADNPG. . VWFFHCHIE
Template Known Secondary structure  SS
TT






GGGT





BTTB




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   410.........420.........430.........440.........450.........460.........470........ .480.......
 
   454.....460........
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Query Sequence  EMADRGSIGQLLVNP
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Template Sequence  WHLLQGLGLVLVEDP
Template Known Secondary structure  TT

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   488.490.........500..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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