Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 13 Aligned Residues 416 % Identity 18% Template c1v10A_ PDB info PDB header:oxidase Chain: A: PDB Molecule:laccase; PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally2 twinned crystals Resolution 1.7 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.															.	.
Query SS confidence																																																							.	.	.	.	.															.	.
Query Sequence		R	G	Q	P	L	F	M	T	V	Q	R	A	H	W	S	F	T	P	G	T	R	A	S	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	.	.	.	.	.	E	N	V	S	M	T	V	A	G	L	Q	V	P	G	.	.	P	L	M	G	G	P
Query Conservation																																																							.	.	.	.	.															.	.
Alig confidence																																																							.	.	.	.	.															.	.
Template Conservation
Template Sequence		A	T	V	A	L	D	L	H	I	L	N	A	N	L	D	P	D	G	T	G	A	R	S	A	V	T	A	E	G	T	T	I	A	P	L	I	T	G	N	I	D	D	R	F	Q	I	N	V	I	D	Q	L	T	D	A	N	M	R	R	A	T	S	I	H	W	H	G	F	F	Q	A	G	T	T	E	M	D	G	P	A
Template Known Secondary structure				S													T	T	S	S									S	S	S	S	S								T	T														T	T	S				B						T				T	T		G	G	G	S			B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
					117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	R	M	M	S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D	D	F	P	V	I	I	Q	D	K	R	L	D	N
Query Conservation		.	.	.
Alig confidence		.	.	.																													.	.	.	.																									.
Template Conservation																																	.	.	.	.																									.
Template Sequence		F	V	N	Q	C	P	I	I	P	N	E	S	F	V	Y	D	F	V	V	P	G	Q	A	G	T	Y	W	Y	H	S	H	.	.	.	.	L	S	T	Q	Y	C	D	G	L	R	G	A	F	V	V	Y	D	P	N	D	P	H	L	S	.	L	Y	D	V	D	D	A	S	T	V	I	T	I	A	D	W	Y	H	S	L
Template Known Secondary structure		T	T	T	B			B		T	T										T	T											.	.	.	.	S	T	T	G	G	G	G	T										T	T		T	T	G	G	.	G		S	B		S	G	G	G									S	S
Template Predicted Secondary structure																																	.	.	.	.																									.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure												.	.																										.
Query SS confidence												.	.																										.
Query Sequence		F	G	T	P	E	Y	N	E	P	G	.	.	S	G	G	F	V	G	D	T	L	L	V	N	G	V	Q	S	P	Y	V	E	V	S	R	G	W	.	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G	R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K	Q
Query Conservation												.	.																										.
Alig confidence												.	.																										.																			.																.
Template Conservation																																																										.																.
Template Sequence		S	T	K	A	P	P	A	P	D	T	T	L	I	N	G	L	G	R	N	S	A	N	P	S	A	G	Q	L	A	V	V	S	V	Q	S	G	K	R	Y	R	F	R	I	V	S	T	S	C	F	P	N	Y	A	F	S	I	.	D	G	H	R	M	T	V	I	E	V	D	G	V	S	H	.	Q	P	L	T	V	D	S
Template Known Secondary structure							S			S					T	T	B				S	S		G	G	G	S									T	T												S	S								.	T	T									T	T				.						S	B
Template Predicted Secondary structure																																																										.																.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.												.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C	G	E	A	A	S	I	V	D	R	I	.	.	.	.	.	.	.	.	.	.	.	R	G	F	F	E	P	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L	P	M	R
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	I	F	A	G	Q	R	Y	S	V	V	V	E	A	N	Q	A	V	G	N	Y	W	I	R	A	N	P	S	N	G	R	N	G	F	T	G	G	I	N	S	A	I	F	R	Y	Q	G	A	A	V	A	E	P	T	T	S	Q	N	S	G	T	A	L	N	E	A	N	L	I	P	L	I	N	P	G	A	P	G	N
Template Known Secondary structure						T	T											S		S	S									S	S	S	S		S		G	G	G	T	T							T	T			S										S		B			G	G	G			B	S	S					S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	P	T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D	D	P	G	I	N	G	Q	L	W	D	V	N	R	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A	D	E	P	Q	A	F	H	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	P	G	G	A	D	I	N	L	N	L	R	I	G	R	N	A	T	T	A	D	F	T	I	N	G	A	P	F	I	P	P	T	V	P	V	L	L	Q	I	L	S	G	V	T	N	P	N	D	L	L	P	G	G	A	V	I	S	L	P	A	N	Q	V	I	E	I	S	I	P	G	G	G	N	H	P	F	H	L
Template Known Secondary structure		S	S	T	T		S	S											S	S	S	S					S	S							S	S									T				G	G	G	S	S	S	T	T	T						T	T											B	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																.
Query SS confidence																			.																.
Query Sequence		E	G	V	M	F	Q	I	R	N	V	N	G	A	M	P	F	P	.	E	D	R	G	W	K	D	T	V	W	V	D	G	Q	V	.	E	L	L	V	Y	F	G	Q	P	S	W	A	H	F	P	F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N	P
Query Conservation																			.																.
Alig confidence																			.																.													.	.
Template Conservation																																																.	.
Template Sequence		H	G	H	N	F	D	V	V	R	T	P	G	S	S	V	Y	N	Y	V	N	P	V	R	R	D	V	V	S	I	G	G	G	G	D	N	V	T	F	R	F	V	T	D	N	P	G	.	.	P	W	F	L	H	C	H	I	D	W	H	L	E	A	G	L	A	V	V	F	A	E	D	I
Template Known Secondary structure		S	S									T	T		S					S	S					S						B	S	S											S			.	.							S						T	T	T								S	G
Template Predicted Secondary structure																																																.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470