Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 23 Aligned Residues 264 % Identity 16% Template c1kbwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae Resolution 2.40 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	K	A	S	A	A	G	Q	Q	Q	P	L	P	V	P	P	L	L	E	S	R	R	G	Q	P	L	F	M	T	V	Q	R	A	H	W	S	F	T	P	G	T	R	A	S	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	E	N	V	S
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		L	P	V	I	D	A	V	T	T	H	A	P	E	V	P	P	A	I	D	R	D	Y	P	A	K	V	R	V	K	M	E	T	V	E	K	T	M	K	M	D	D	G	V	E	Y	R	Y	W	T	F	D	G	D	V	P	G	R	M	I	R	V	R	E	G	D	T	V	E	V	E	F	S	N	N	P	.	S	S	T	V
Template Known Secondary structure										B		T	T										S																			T	T									T	T	B	S	S			B					T	T											T	.	T		S	S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		M	T	V	A	G	L	Q	V	P	G	P	L	M	G	G	P	.	A	R	M	M	S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V
Query Conservation																		.
Alig confidence																		.																			.													.																									.	.	.	.	.	.
Template Conservation																																					.													.																									.	.	.	.	.	.
Template Sequence		P	H	N	V	D	F	H	A	A	T	G	Q	G	G	G	A	A	A	T	F	T	A	P	G	R	T	S	T	F	S	F	K	A	L	Q	.	P	G	L	Y	I	Y	H	C	A	V	A	P	.	V	G	M	H	I	A	N	G	M	Y	G	L	I	L	V	E	P	K	E	G	L	P	K	V	.	.	.	.	.	.	D
Template Known Secondary structure			B					T	T			S	G	G	G	G	T	T	T	T		B		T	T											S	.											S	S	.							T	T										T	T						.	.	.	.	.	.	S
Template Predicted Secondary structure																																					.													.																									.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.																		.	.	.	.	.								.
Query SS confidence																											.	.	.	.																		.	.	.	.	.								.
Query Sequence		D	D	F	P	V	I	I	Q	D	K	R	L	D	N	F	G	T	P	E	Y	N	E	P	G	S	.	.	.	.	G	G	F	V	G	D	T	L	L	V	N	G	V	Q	S	P	Y	.	.	.	.	.	V	E	V	S	R	G	W	.	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G
Query Conservation																											.	.	.	.																		.	.	.	.	.								.
Alig confidence																											.	.	.	.																		.	.	.	.	.								.																			.
Template Conservation																																																																															.
Template Sequence		K	E	F	Y	I	V	Q	G	D	F	Y	T	K	G	K	K	G	A	Q	G	L	Q	P	F	D	M	D	K	A	V	A	E	Q	P	E	Y	V	V	F	N	G	H	V	G	A	L	T	G	D	N	A	L	K	A	K	A	G	E	T	V	R	M	Y	V	G	N	G	G	P	N	L	V	S	S	F	H	V	.	I	G
Template Known Secondary structure													B	S	S		T	T							B							T	T			S					T	T	S	T	T	T	T	S	G	G	G						T	T												S	S								.		T
Template Predicted Secondary structure																																																																															.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K	Q	L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		E	I	F	D	K	V	Y	V	E	G	G	K	L	I	.	N	E	N	V	Q	S	T	I	V	P	A	G	G	S	A	I	V	E	F	K	V	D	I	P	G	N	Y	T	L	V	D
Template Known Secondary structure				B	S				G	G	G	S	S			.			S	B	S						T	T											S
Template Predicted Secondary structure																.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions