Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 11 Aligned Residues 414 % Identity 18% Template c1gycA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:laccase 2; PDBTitle: crystal structure determination at room temperature of a2 laccase from trametes versicolor in its oxidised form3 containing a full complement of copper ions Resolution 1.9 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.														.	.								.
Query SS confidence																																																						.	.	.	.	.														.	.								.
Query Sequence		G	Q	P	L	F	M	T	V	Q	R	A	H	W	S	F	T	P	G	T	R	A	S	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	.	.	.	.	.	E	N	V	S	M	T	V	A	G	L	Q	V	P	.	.	G	P	L	M	G	G	P	.
Query Conservation																																																						.	.	.	.	.														.	.								.
Alig confidence																	.																																					.	.	.	.	.														.	.								.
Template Conservation																	.
Template Sequence		G	P	A	A	S	L	V	V	A	N	A	P	V	S	P	.	D	G	F	L	R	D	A	I	V	V	N	G	V	F	P	S	P	L	I	T	G	K	K	G	D	R	F	Q	L	N	V	V	D	T	L	T	N	H	T	M	L	K	S	T	S	I	H	W	H	G	F	F	Q	A	G	T	N	W	A	D	G	P	A	F
Template Known Secondary structure			S													T	.	T	S									T	T	B	S	S								T	T														G	G	G		S		B						T				T	T		G	G	G	S			B	T
Template Predicted Secondary structure																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	R	M	M	S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D	D	F	P	V	I	I	Q	D	K	R	L	D	N	F
Query Conservation		.	.
Alig confidence		.	.																													.	.	.	.																									.
Template Conservation																																.	.	.	.																									.
Template Sequence		V	N	Q	C	P	I	A	S	G	H	S	F	L	Y	D	F	H	V	P	D	Q	A	G	T	F	W	Y	H	S	H	.	.	.	.	L	S	T	Q	Y	C	D	G	L	R	G	P	F	V	V	Y	D	P	K	D	P	H	A	S	.	R	Y	D	V	D	N	E	S	T	V	I	T	L	T	D	W	Y	H	T	A	A
Template Known Secondary structure		T	T	B			B		T	T										S	S											.	.	.	.	S	T	T	G	G	G	G	T										T	T		T	T	G	G	.	G		S	B		S	G	G	G									S	S		T
Template Predicted Secondary structure																																.	.	.	.																									.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																								.
Query SS confidence													.	.	.	.																								.
Query Sequence		G	T	P	E	Y	N	E	P	G	S	G	.	.	.	.	G	F	V	G	D	T	L	L	V	N	G	V	Q	S	P	Y	V	E	V	S	R	G	W	.	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G	R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K
Query Conservation													.	.	.	.																								.
Alig confidence													.	.	.	.																								.																			.																.
Template Conservation																																																											.																.
Template Sequence		R	L	G	P	R	F	P	L	G	A	D	A	T	L	I	N	G	L	G	R	S	A	S	T	P	T	A	A	L	A	V	I	N	V	Q	H	G	K	R	Y	R	F	R	L	V	S	I	S	C	D	P	N	Y	T	F	S	I	.	D	G	H	N	L	T	V	I	E	V	D	G	I	N	S	.	Q	P	L	L	V	D
Template Known Secondary structure		T	T	S		S	S		S	S		S					T	T	B			B	T	T		T	T	S									T	T												S	S								.	T	T									T	T				.						S
Template Predicted Secondary structure																																																											.																.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.								.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		Q	L	S	L	A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C	G	E	A	A	S	I	V	D	R	I	R	G	F	.	.	.	.	.	.	.	F	E	P	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L	P	M	R	L	L	P
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	I	Q	I	F	A	A	Q	R	Y	S	F	V	L	N	A	N	Q	T	V	G	N	Y	W	I	R	A	N	P	N	F	G	T	V	G	F	A	G	G	I	N	S	A	I	L	R	Y	Q	G	A	P	V	A	E	P	T	T	T	Q	T	T	S	V	I	P	L	I	E	T	N	L	H	P	L	A	R	M	P	V	P
Template Known Secondary structure		B					T	T											S		S	S									S	S	S	S		S		G	G	G	T	T							T	T	S		S	S										S	S	B			G	G	G			B	S	S					S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.				.	.	.	.	.	.	.	.	370	.	.	.	.	.																						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390						.	.	.
Predicted Secondary structure																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query SS confidence																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Query Sequence		T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D	D	.	.	.	P	G	I	N	G	Q	L	W	D	V	N	R	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A	.	.	.	.	.	D	E	P
Query Conservation																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Alig confidence																					.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		G	S	P	T	P	G	G	V	D	K	A	L	N	L	A	F	N	F	N	G	T	N	F	F	I	N	N	A	S	F	T	P	P	T	V	P	V	L	L	Q	I	L	S	G	A	Q	T	A	Q	D	L	L	P	A	G	S	V	Y	P	L	P	A	H	S	T	I	E	I	T	L	P	A	T	A	L	A	P	G	A	P
Template Known Secondary structure		S		S	S	T	T		S	S											S	S					T	T	B						S	S								T	T			S	T	T	T	S	S	S	T	T	S						T	T											T	T	S		S		S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.				.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.															.	.	.
Query SS confidence																					.															.	.	.
Query Sequence		Q	A	F	H	I	E	G	V	M	F	Q	I	R	N	V	N	G	A	M	.	P	F	P	E	D	R	G	W	K	D	T	V	W	V	.	.	.	D	G	Q	V	E	L	L	V	Y	F	G	Q	P	S	W	A	H	F	P	F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N	P
Query Conservation																					.															.	.	.
Alig confidence																					.															.	.	.																	.	.
Template Conservation																																																							.	.
Template Sequence		H	P	F	H	L	H	G	H	A	F	A	V	V	R	S	A	G	S	T	T	Y	N	Y	N	D	P	I	F	R	D	V	V	S	T	G	T	P	A	A	G	D	N	V	T	I	R	F	Q	T	D	N	P	G	.	.	P	W	F	L	H	C	H	I	D	F	H	L	E	A	G	F	A	I	V	F	A	E	D	V
Template Known Secondary structure							T	T									T	T						S	S	S					S							G	G	G	T											S			.	.							S	S						T	T								T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.