Job Description P26648 Confidence 100.00% Date Thu Jan 5 11:43:06 GMT 2012 Rank 15 Aligned Residues 412 % Identity 19% Template c1a65A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:laccase; PDBTitle: type-2 cu-depleted laccase from coprinus cinereus Resolution 2.23 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.				.
Predicted Secondary structure																																																			.	.	.	.	.													.	.									.	.	.
Query SS confidence																																																			.	.	.	.	.													.	.									.	.	.
Query Sequence		L	F	M	T	V	Q	R	A	H	W	S	F	T	P	G	T	R	A	S	V	W	G	I	N	G	R	Y	L	G	P	T	I	R	V	W	K	G	D	D	V	K	L	I	Y	S	N	R	L	T	.	.	.	.	.	E	N	V	S	M	T	V	A	G	L	Q	V	.	.	P	G	P	L	M	G	G	P	.	.	.	A
Query Conservation																																																			.	.	.	.	.													.	.									.	.	.
Alig confidence														.													.																								.	.	.	.	.													.	.									.	.	.
Template Conservation														.													.
Template Sequence		D	T	M	T	L	T	N	A	N	V	S	P	.	D	G	F	T	R	A	G	I	L	V	N	G	.	V	H	G	P	L	I	R	G	G	K	N	D	N	F	E	L	N	V	V	N	D	L	D	N	P	T	M	L	R	P	T	S	I	H	W	H	G	L	F	Q	R	G	T	N	W	A	D	G	A	D	G	V	N	Q
Template Known Secondary structure													T	.	T	S									T	T	.	B	S	S							T	T														T	T	S			S	B						T				T	T		G	G	G	S			B	T	T	T	B
Template Predicted Secondary structure														.													.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	M	S	P	N	A	D	W	A	P	V	L	P	I	R	Q	N	A	A	T	L	W	Y	H	A	N	T	P	N	R	T	A	Q	Q	V	Y	N	G	L	A	G	M	W	L	V	E	D	E	V	S	K	S	L	P	I	P	N	H	Y	G	V	D	D	F	P	V	I	I	Q	D	K	R	L	D	N	F	G	T	P
Query Conservation
Alig confidence																													.	.	.	.																									.
Template Conservation																													.	.	.	.																									.
Template Sequence		C	P	I	S	P	G	H	A	F	L	Y	K	F	T	P	A	G	H	A	G	T	F	W	Y	H	S	H	.	.	.	.	F	G	T	Q	Y	C	D	G	L	R	G	P	M	V	I	Y	D	D	N	D	P	H	A	A	.	L	Y	D	E	D	D	E	N	T	I	I	T	L	A	D	W	Y	H	I	P	A	P	S	I
Template Known Secondary structure				B		T	T										T	T											.	.	.	.	S	T	T	G	G	G	G	T										T	T		T	T	G	G	.	G		S	B		S	G	G	G									S	S		G	G	G
Template Predicted Secondary structure																													.	.	.	.																									.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure									.	.	.																									.
Query SS confidence									.	.	.																									.
Query Sequence		E	Y	N	E	P	G	S	.	.	.	G	G	F	V	G	D	T	L	L	V	N	G	V	Q	S	P	Y	V	E	V	S	R	G	W	.	V	R	L	R	L	L	N	A	S	N	S	R	R	Y	Q	L	Q	M	N	D	G	R	P	L	H	V	I	S	G	D	Q	G	F	L	P	A	P	V	S	V	K	Q	L	S	L
Query Conservation									.	.	.																									.
Alig confidence									.	.	.																									.																			.																	.
Template Conservation																																																							.																	.
Template Sequence		Q	G	A	A	Q	P	D	A	T	L	I	N	G	K	G	R	Y	V	G	G	P	A	A	E	L	S	I	V	N	V	E	Q	G	K	K	Y	R	M	R	L	I	S	L	S	C	D	P	N	W	Q	F	S	I	.	D	G	H	E	L	T	I	I	E	V	D	G	E	L	T	E	.	P	H	T	V	D	R	L	Q	I
Template Known Secondary structure			S	S				S					T	T	B			B	T	T													T	T												S	S								.	T	T									T	T					.					S	B
Template Predicted Secondary structure																																																							.																	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.															.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	G	E	R	R	E	I	L	V	D	M	S	N	G	D	E	V	S	I	T	C	G	E	A	A	S	I	V	D	R	I	R	G	F	F	E	P	S	S	I	L	V	S	T	L	V	L	T	L	R	P	T	G	L	L	P	L	V	T	D	S	L	P	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	G	Q	R	Y	S	F	V	L	D	A	N	Q	P	V	D	N	Y	W	I	R	A	Q	P	N	K	G	R	N	G	L	A	G	T	F	A	N	G	V	N	S	A	I	L	R	Y	A	G	A	A	N	A	D	P	T	T	S	A	N	P	N	P	A	Q	L	N	E	A	D	L	H	A	L	I	D	P	A	A	P
Template Known Secondary structure			T	T											S		S	S									S			G	G	G	G	G	G			G	G	G	T	T							T	T	S		S	S								S	S			B			G	G	G		B	B	S	S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.																						.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		L	L	P	T	E	I	M	A	G	S	P	I	R	S	R	D	I	S	L	G	D	D	P	G	I	N	G	Q	L	W	D	V	N	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	A	Q	Q	G	T	W	E	R	W	T	V	R	A	.	.	.	D	E	P	Q	A
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		G	I	P	T	P	G	A	A	D	V	N	L	R	F	Q	L	G	F	S	G	G	R	F	T	I	N	G	T	A	Y	E	S	P	S	V	P	T	L	L	Q	I	M	S	G	A	Q	S	A	N	D	L	L	P	A	G	S	V	Y	E	L	P	R	N	Q	V	V	E	L	V	V	P	A	G	V	L	G	G	P	H	P
Template Known Secondary structure		S		S	S	T	T		S	S											S	S	S				T	T	B						S	S								T	T			S	G	G	G	S	S	S	T	T	S						S	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																	.																			.
Query SS confidence																	.																			.
Query Sequence		F	H	I	E	G	V	M	F	Q	I	R	N	V	N	G	.	A	M	P	F	P	E	D	R	G	W	K	D	T	V	W	V	D	G	.	Q	V	E	L	L	V	Y	F	G	Q	P	S	W	A	H	F	P	F	Y	F	N	S	Q	T	L	E	M	A	D	R	G	S	I	G	Q	L	L	V	N	P	V	P
Query Conservation																	.																			.
Alig confidence																	.																			.															.	.
Template Conservation																																																			.	.
Template Sequence		F	H	L	H	G	H	A	F	S	V	V	R	S	A	G	S	S	T	Y	N	F	V	N	P	V	K	R	D	V	V	S	L	G	V	T	G	D	E	V	T	I	R	F	V	T	D	N	P	G	.	.	P	W	F	F	H	C	H	I	E	F	H	L	M	N	G	L	A	I	V	F	A	E	D	M	A	N
Template Known Secondary structure					T	T									T	T						S	S	S	B				S						S	T	T											S			.	.							S	S					T	T	T									G	G	G
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.