Return to main results Retrieve Phyre Job Id

Job DescriptionP21179
Confidence100.00%DateThu Jan 5 11:38:00 GMT 2012
Rank12Aligned Residues489
% Identity40%Templated4blca_
SCOP infoHeme-dependent catalase-like Heme-dependent catalase-like Heme-dependent catalases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  DTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYF
Query Conservation                        
   
 
      
   
  

 

 
    
   









 




 

 
 
Alig confidence 















































































Template Conservation                        
   
 
      
   
  

 

 
    
   









 




 

 
 
Template Sequence  DPASDQMKHWKEQRAAQKPDVLTTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYF
Template Known Secondary structure 
TTTTTSS





B
TTS
B
S
TTS

BSSTT

B
TT
TT





SSS
S
Template Predicted Secondary structure 




































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   139140.........150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  QPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFV
Query Conservation    
 
 
 

 
  
   

 


 





 
  




 











 


 





 







  

  
Alig confidence 















































































Template Conservation    
 
 
  
 
  
   

 


 




  
  

 

 









 
 

  


 

 







  
   
Template Sequence  EVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFI
Template Known Secondary structure 
S

TTT


TTTSSTT

SS

SS

SSSSS

TTSSSS
S
SSTTT
Template Predicted Secondary structure 







































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  HAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAG
Query Conservation   
 

 
 
  
    

    

    


 
    
 
 
  
 

     





 


  
    

 
  
  
Alig confidence 











....































































Template Conservation   
 
  
 
   ....
     

    


      
 
 
  
 

    


 


 


  
    

    
  
Template Sequence  HSQKRNPQTHLK. . . . DPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMDGYGSHTFKLVNADGEAVYCKFHYKTDQG
Template Known Secondary structure  SB
TTT
SB....

GGGTSGGGSBSSSTT



S

TT

TT
Template Predicted Secondary structure 








....


























Template SS confidence 















































































   165....170...... ...180.........190.........200.........210.........220.........230.........240
 
   299300.........310.........320.........330.........340.........350.........360.........370........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRN
Query Conservation     

 


   

 




  

  

  
  
 
 
 


    
         
 




    


 

 
 



Alig confidence 















































































Template Conservation     
  


      




  

   
  
    
 
 


    
       
 
 

 


   
 
 

 
 


 
Template Sequence  IKNLSVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVMTFSEAEIFPFNPFDLTKVWPHGDYPLIPVGKLVLNRN
Template Known Secondary structure 

B


TTTT



T
SS
TT
TT



TTTS

Template Predicted Secondary structure 







































Template SS confidence 















































































   241........250.........260.........270.........280.........290.........300.........310.........320
 
   379380.........390.........400.........410.........420.........430....... ..440.........450.......
Predicted Secondary structure 

































.
















Query SS confidence 


























































.



















Query Sequence  PDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPT. CPYHNFQRDGMHRMGIDTNP
Query Conservation 
 
 


 

 

 
  





 
 




 
 


 


  

 
 
  




 
 .    
  


          
Alig confidence 












































.












.



















Template Conservation    
   
 

 

 
  

 

  
 




 
 


 


  

.
 
  




 
      
  


 
    
   
Template Sequence  PVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRL. GPNYLQIPVNCPYRARVANYQRDGPMCMMDNQGG
Template Known Secondary structure 
SSTTT



TT


TT



T.
TTGGGSGGGS
TTS


SS



SS

TTTTTT
Template Predicted Secondary structure 























.






























Template SS confidence 















































































   321........330.........340.........350.........360..... ....370.........380.........390.........
 
   458 .460.........470.........480.........490.........500.........510.. .......520.........530.....
Predicted Secondary structure 
.



































.




Query SS confidence 
.





















































.






















Query Sequence  A. NYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW. LSQTPFEQRHIVDGFSFELSKVV
Query Conservation   . 
 

      
                    
   
       
   


 
 .      

  

      
  
 
Alig confidence 
.











........

















.














.





















.
Template Conservation   


 


      ........            
   
 .     
   
 
 
         
  

 
    
   .
Template Sequence  APNYYPNSFSAPEH. . . . . . . . QPSALEHRTHFSGDVQRF. NSANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDA.
Template Known Secondary structure 


SSS
SS




........
GGG










S

.

SSS
SSTTS
TTS.
Template Predicted Secondary structure 













........







.











.
Template SS confidence 















































































   400.........410... ......420.........430. ........440.........450.........460.........
 
   536...540.........550.........560..
Predicted Secondary structure 



Query SS confidence 


























Query Sequence  RPYIRERVVDQLAHIDLTLAQAVAKNL
Query Conservation     
  
       

  
  


  
Alig confidence 


























Template Conservation     
  
       

  
   

  
Template Sequence  QLFIQKKAVKNFSDVHPEYGSRIQALL
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 


























   470.........480.........490......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions