|   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | R | N | E | K | L | N | S | L | E | D | V | R | K | G | S | E | N | Y | A | L | T | T | N | Q | G | V | R | I | A | D | D | Q | N | S | L | R | A | G | S | R | G | P | T | L | L | E | D | F | I | L | R | E | K | I | T | H | F | D | H | E | R | I | P | E | R | I | V | H | A | R | G | S | A | A | H | G | Y | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |
|
Template Sequence |   |
D | P | A | S | D | Q | M | K | H | W | K | E | Q | R | A | A | Q | K | P | D | V | L | T | T | G | G | G | N | P | V | G | D | K | L | N | S | L | T | V | G | P | R | G | P | L | L | V | Q | D | V | V | F | T | D | E | M | A | H | F | D | R | E | R | I | P | E | R | V | V | H | A | K | G | A | G | A | F | G | Y | F |
Template Known Secondary structure |   |
| T | T | T | T |  |  |  |  |  |  |  |  | T | S | S |
|
|
|
|
|
| B |
| T | T | S |
| B |
| S |
| T | T | S |
|
| B | S | S | T | T |
|
| B |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
| S | S | S |
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | Y | K | S | L | S | D | I | T | K | A | D | F | L | S | D | P | N | K | I | T | P | V | F | V | R | F | S | T | V | Q | G | G | A | G | S | A | D | T | V | R | D | I | R | G | F | A | T | K | F | Y | T | E | E | G | I | F | D | L | V | G | N | N | T | P | I | F | F | I | Q | D | A | H | K | F | P | D | F | V |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
Template Sequence |   |
E | V | T | H | D | I | T | R | Y | S | K | A | K | V | F | E | H | I | G | K | R | T | P | I | A | V | R | F | S | T | V | A | G | E | S | G | S | A | D | T | V | R | D | P | R | G | F | A | V | K | F | Y | T | E | D | G | N | W | D | L | V | G | N | N | T | P | I | F | F | I | R | D | A | L | L | F | P | S | F | I |
Template Known Secondary structure |   |
 |  |
| S |
|
| T | T | T |
|
|
| T | T | T | S | S | T | T |
|  |  |  |  |  |  |  |  |  |
| S | S |
|
| S | S |
|
| S | S | S | S | S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S | S |
| S |
| S | S | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | V | K | P | E | P | H | W | A | I | P | Q | G | Q | S | A | H | D | T | F | W | D | Y | V | S | L | Q | P | E | T | L | H | N | V | M | W | A | M | S | D | R | G | I | P | R | S | Y | R | T | M | E | G | F | G | I | H | T | F | R | L | I | N | A | E | G | K | A | T | F | V | R | F | H | W | K | P | L | A | G |
Query Conservation |   |
  |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |
|   |   |   | . | . | . | . |
|   |   |   |   |   |
|
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|
Template Sequence |   |
H | S | Q | K | R | N | P | Q | T | H | L | K | . |
. |
. |
. |
D | P | D | M | V | W | D | F | W | S | L | R | P | E | S | L | H | Q | V | S | F | L | F | S | D | R | G | I | P | D | G | H | R | H | M | D | G | Y | G | S | H | T | F | K | L | V | N | A | D | G | E | A | V | Y | C | K | F | H | Y | K | T | D | Q | G |
Template Known Secondary structure |   |
 |  |  | S | B |
| T | T | T |
| S | B | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  | T | S | G | G | G | S | B | S | S | S | T | T |
|
|  |  |
|
| S |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | |
|
|
|
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
  |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | S | L | V | W | D | E | A | Q | K | L | T | G | R | D | P | D | F | H | R | R | E | L | W | E | A | I | E | A | G | D | F | P | E | Y | E | L | G | F | Q | L | I | P | E | E | D | E | F | K | F | D | F | D | L | L | D | P | T | K | L | I | P | E | E | L | V | P | V | Q | R | V | G | K | M | V | L | N | R | N |
Query Conservation |   |
  |   |   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|   |
Template Sequence |   |
I | K | N | L | S | V | E | D | A | A | R | L | A | H | E | D | P | D | Y | G | L | R | D | L | F | N | A | I | A | T | G | N | Y | P | S | W | T | L | Y | I | Q | V | M | T | F | S | E | A | E | I | F | P | F | N | P | F | D | L | T | K | V | W | P | H | G | D | Y | P | L | I | P | V | G | K | L | V | L | N | R | N |
Template Known Secondary structure |   |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  | T |
| S | S |
| T | T |
| T | T |
|
|
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
  |
  |   |
379 | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | |
. | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | N | F | F | A | E | N | E | Q | A | A | F | H | P | G | H | I | V | P | G | L | D | F | T | N | D | P | L | L | Q | G | R | L | F | S | Y | T | D | T | Q | I | S | R | L | G | G | P | N | F | H | E | I | P | I | N | R | P | T | . |
C | P | Y | H | N | F | Q | R | D | G | M | H | R | M | G | I | D | T | N | P |
Query Conservation |   |
|   |
|   |
|
|
|   |
|
|   |
|
|   |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|   |
|   | . |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|
|   |
|
|   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|
| . |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
P | V | N | Y | F | A | E | V | E | Q | L | A | F | D | P | S | N | M | P | P | G | I | E | P | S | P | D | K | M | L | Q | G | R | L | F | A | Y | P | D | T | H | R | H | R | L | . |
G | P | N | Y | L | Q | I | P | V | N | C | P | Y | R | A | R | V | A | N | Y | Q | R | D | G | P | M | C | M | M | D | N | Q | G | G |
Template Known Secondary structure |   |
| S | S |  |  |  |  | T | T | T |
|
|
|
| T | T |
|
|
| T | T |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |
| T | T | G | G | G | S | G | G | G | S |
| T | T | S |
|
|
| S | S |
|
|
|
| S | S |
|
| T | T | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | |
. | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . |
  |
  |   |
458 | |
. | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
. | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . |
Predicted Secondary structure |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | . |
N | Y | E | P | N | S | I | N | D | N | W | P | R | E | T | P | P | G | P | K | R | G | G | F | E | S | Y | Q | E | R | V | E | G | N | K | V | R | E | R | S | P | S | F | G | E | Y | Y | S | H | P | R | L | F | W | . |
L | S | Q | T | P | F | E | Q | R | H | I | V | D | G | F | S | F | E | L | S | K | V | V |
Query Conservation |   |
  | . |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   | . |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|
|
|   |
|
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |   |   | . |
Template Sequence |   |
A | P | N | Y | Y | P | N | S | F | S | A | P | E | H | . |
. |
. |
. |
. |
. |
. |
. |
Q | P | S | A | L | E | H | R | T | H | F | S | G | D | V | Q | R | F | . |
N | S | A | N | D | D | N | V | T | Q | V | R | T | F | Y | L | K | V | L | N | E | E | Q | R | K | R | L | C | E | N | I | A | G | H | L | K | D | A | . |
Template Known Secondary structure |   |
|
|
| S | S | S |
| S | S |
|
|
|
|
| . | . | . | . | . | . | . | . |
| G | G | G |
|
|
|
|
|
|
|
|
|
|
| S |
|
| . |
|
| S | S | S |
| S | S |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | |
. | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | |
  |
  |   |
536 | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | Y | I | R | E | R | V | V | D | Q | L | A | H | I | D | L | T | L | A | Q | A | V | A | K | N | L |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|
Template Sequence |   |
Q | L | F | I | Q | K | K | A | V | K | N | F | S | D | V | H | P | E | Y | G | S | R | I | Q | A | L | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
  |