|   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | L | T | T | N | Q | G | V | R | I | A | D | D | Q | N | S | L | R | A | G | S | R | G | P | T | L | L | E | D | F | I | L | R | E | K | I | T | H | F | D | H | E | R | I | P | E | R | I | V | H | A | R | G | S | A | A | H | G | Y | F | Q | P | Y | K | S | L | S | D | I | T | K | A | D | F | L | S | D | P | N |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|
Template Sequence |   |
Q | H | L | T | T | S | Q | G | S | P | V | G | D | N | Q | N | S | L | T | A | G | E | F | G | P | V | L | I | Q | D | V | H | L | L | E | K | L | A | H | F | N | R | E | R | V | P | E | R | V | V | H | A | K | G | A | G | A | H | G | I | F | K | V | S | Q | S | M | A | Q | Y | T | K | A | D | F | L | S | E | V | G |
Template Known Secondary structure |   |
|
|
| B |
| T | T | S |
| B |
| S |
| S | S | S |
|
| B | S | S | T | T | S |
| B |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  | S | S |
|
| T | T | T |
|
|
| G | G | G | S | S | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | T | P | V | F | V | R | F | S | T | V | Q | G | G | A | G | S | A | D | T | V | R | D | I | R | G | F | A | T | K | F | Y | T | E | E | G | I | F | D | L | V | G | N | N | T | P | I | F | F | I | Q | D | A | H | K | F | P | D | F | V | H | A | V | K | P | E | P | H | W | A | I | P | Q | G | Q | S | A | H | D |
Query Conservation |   |
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|
|   |
|   |
|   |   |
|   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   | . | . | . | . |
|   |   |
Template Sequence |   |
K | E | T | P | L | F | A | R | F | S | T | V | A | G | E | L | G | S | S | D | T | L | R | D | P | R | G | F | A | L | K | F | Y | T | D | E | G | N | Y | D | L | V | G | N | N | T | P | I | F | F | I | R | D | A | I | K | F | P | D | F | I | H | S | Q | K | R | N | P | R | T | H | L | K | . |
. |
. |
. |
S | P | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| S | S |
|
| T | T |
|
| S | S | S | S | S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S | S |
| S |
| S |
| G | G | G |  |  |  |  |  |  |  |  | S | B |
| T | T | T |
| S | B | . | . | . | . |
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
. | . | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | W | D | Y | V | S | L | Q | P | E | T | L | H | N | V | M | W | A | M | S | D | R | G | I | P | R | S | Y | R | T | M | E | G | F | G | I | H | T | F | R | L | I | N | A | E | G | K | A | T | F | V | R | F | H | W | K | P | L | A | G | K | A | S | L | V | W | D | E | A | Q | K | L | T | G | R | D | P | D | F |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |
|
|
|   |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
Template Sequence |   |
A | V | W | D | F | W | S | H | S | P | E | S | L | H | Q | V | T | I | L | M | S | D | R | G | I | P | L | S | F | R | H | M | H | G | F | G | S | H | T | F | K | W | V | N | A | A | G | E | V | F | F | V | K | Y | H | F | K | T | N | Q | G | I | K | N | L | E | S | Q | L | A | E | E | I | A | G | K | N | P | D | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| G | G | G |  |  |  |  |  |  |  |  | S | G | G | G | S | B | S |
| G | G | G | S |
|  |  |
|
| S |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |
| T | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
  |   |
318 | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | R | R | E | L | W | E | A | I | E | A | G | D | F | P | E | Y | E | L | G | F | Q | L | I | P | E | E | D | E | F | K | F | D | F | D | L | L | D | P | T | K | L | I | P | E | E | L | V | P | V | Q | R | V | G | K | M | V | L | N | R | N | P | D | N | F | F | A | E | N | E | Q | A | A | F | H | P | G | H | I | V |
Query Conservation |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|   |
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |
|
|   |
|   |   |
|
|
Template Sequence |   |
H | I | E | D | L | H | N | A | I | E | N | Q | E | F | P | S | W | T | L | S | V | Q | I | I | P | Y | A | D | A | L | T | M | K | E | T | L | F | D | V | T | K | T | V | S | Q | K | E | Y | P | L | I | E | V | G | T | M | T | L | N | R | N | P | E | N | Y | F | A | E | V | E | Q | V | T | F | S | P | G | N | F | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | T |
| T | T |
|
|
|
| T | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  | T | T | T |
|
|
|
| T | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
  |   |
398 | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | L | D | F | T | N | D | P | L | L | Q | G | R | L | F | S | Y | T | D | T | Q | I | S | R | L | G | G | P | N | F | H | E | I | P | I | N | R | P | T | C | P | Y | H | N | F | Q | R | D | G | M | H | R | M | G | I | D | T | N | P | A | N | Y | E | P | N | S | I | N | D | N | W | P | R | E | T | P | P | G | P |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|   |
|
|
|   |   |
|
| . |
|   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   | . | . | . |
Template Sequence |   |
P | G | I | E | A | S | P | D | K | L | L | Q | G | R | L | F | A | Y | G | D | A | H | R | H | R | V | . |
G | A | N | S | H | Q | L | P | I | N | Q | A | K | A | P | V | N | N | Y | Q | K | D | G | N | M | R | F | N | N | G | N | S | E | I | N | Y | E | P | N | S | Y | T | E | T | P | K | E | D | P | T | . |
. |
. |
Template Known Secondary structure |   |
T | T |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . |
| T | T | G | G | G | S | G | G | G |
|
| S | S |
|
|
|
| S |
|
|
|
| T | T |
| S |
|
|
| S |
| S |
|
|
| S | S |
| S |
| T | T | S |
|
|
|
| G | G | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
. | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
|
  |
  |   |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | G | G | F | E | S | Y | Q | E | R | V | E | G | N | K | V | R | E | R | S | P | S | F | G | E | Y | Y | S | H | P | R | L | F | W | L | S | Q | T | P | F | E | Q | R | H | I | V | D | G | F | S | F | E | L | S | K | V | V | R | P | Y | I | R | E | R | V | V | D | Q | L | A | H | I | D | L | T | L | A | Q | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
A | K | I | S | S | F | E | V | E | G | N | V | G | N | Y | . |
. |
S | Y | N | Q | D | H | F | T | Q | A | N | A | L | Y | N | L | L | P | S | E | E | K | E | N | L | I | N | N | I | A | A | S | L | G | Q | V | K | N | Q | E | I | I | A | R | Q | I | D | L | F | T | R | V | N | P | E | Y | G | A | R |
Template Known Secondary structure |   |
. | . | . | . | G |
|
|
|
|
|
|
|
| S |
| S | S |
|
| . | . |
|
|
|
|
|
| S |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
396 | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | |
|
. | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . |
  |
  |   |
558 | . | 560 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
V | A | K | N | L |
Query Conservation |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
Template Sequence |   |
V | A | Q | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
470 | . | . | . | . |
  |