 |
Job Description | P21179 | Confidence | 89.52% | Date | Thu Jan 5 11:38:00 GMT 2012 |
Rank | 83 | Aligned Residues | 90 |
% Identity | 16% | Template | d1s1ma1 |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Class I glutamine amidotransferases (GAT)
|
Resolution | 2.30 |
|
 |
  |   |
598 | . | 600 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | |
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
V | K | G | R | V | V | A | I | L | . |
. |
. |
. |
. |
L | N | D | E | V | R | S | A | D | L | L | A | I | L | K | A | L | K | A | K | G | V | H | A | K | L | L | Y | S | R | M | G | E | V | T | A | D | D | G | T | V | L | P | I | A | A | T | F | A | G | A | P | S | L | T | V | D | A | V | I | V | P | C | G | . |
. |
Query Conservation |   |
|   |
|
|
|
|
|
|
| . | . | . | . | . |
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|   |
|
|
|   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|   |
|   | . |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
V | S | E | V | T | I | G | M | V | G | K | Y | I | E | L | P | D | A | Y | K | . |
S | V | I | E | A | L | K | H | G | G | L | K | N | R | V | S | V | N | I | K | L | I | D | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | D | V | E | T | R | G | V | E | I | L | K | G | L | D | A | I | L | V | P | G | G | F | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | S | S |
| S | S | G | G | G | G |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| T | T | T | T | T | T |
| S |  |  |  |  |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | |
. | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
  |
  |   |
|
|
671 | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
N | I | A | D | I | A | D | N | G | D | A | N | Y | Y | L | M | E | A | Y | K | H | L | K | P | I | A | L | A | G | D | A | R | K | F | K |
Query Conservation |   |
. | . |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|
|
Alig confidence |   |
. | . |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
Y | R | G | V | E | G | M | . |
. |
. |
. |
. |
. |
I | T | T | A | R | F | A | R | E | N | N | I | P | Y | L | G | I | C | L | G | M | Q | V | A |
Template Known Secondary structure |   |
S | T | T |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
355 | . | . | . | . | 360 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|