 |
Job Description | P21179 | Confidence | 95.69% | Date | Thu Jan 5 11:38:00 GMT 2012 |
Rank | 63 | Aligned Residues | 85 |
% Identity | 11% | Template | d1k9vf_ |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Class I glutamine amidotransferases (GAT)
|
Resolution | 2.40 |
|
 |
  |   |
602 | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | |
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
V | V | A | I | L | L | N | D | E | V | R | S | A | D | L | L | A | I | L | K | A | L | K | A | K | G | V | H | A | K | L | L | Y | S | R | M | G | E | V | T | A | D | D | G | T | V | L | P | I | A | A | T | F | A | G | A | P | S | L | T | V | D | A | V | I | V | P | C | G | . |
. |
. |
. |
N | I | A | D | I | A | D |
Query Conservation |   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |
|
|   |
|   |
|
|
|   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
| . | . | . | . |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
| . | . | . |
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | I | G | I | I | . |
. |
. |
S | V | G | P | G | N | I | M | N | L | Y | R | G | V | K | R | A | S | E | N | F | E | D | V | S | I | E | L | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | P | R | N | D | L | Y | D | L | L | F | I | P | G | V | G | H | F | G | E | G | M | R | R | L | R |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | . |
| S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | S | S | S |
|  |  |  |  |  | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
| S |
|
|
| S |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | |
|
|
. | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . |
  |
  |   |
678 | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | D | A | N | Y | Y | L | M | E | A | Y | K | H | L | K | P | I | A | L | A | G | D | A | R | K | F | K |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|
Template Sequence |   |
E | N | D | L | I | D | F | V | R | K | H | V | E | D | E | R | Y | V | V | G | V | C | L | G | M | Q | L | L |
Template Known Secondary structure |   |
 | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | T |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
363 | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|