Return to main results Retrieve Phyre Job Id

Job DescriptionP21179
Confidence100.00%DateThu Jan 5 11:38:00 GMT 2012
Rank13Aligned Residues489
% Identity39%Templated1dgfa_
SCOP infoHeme-dependent catalase-like Heme-dependent catalase-like Heme-dependent catalases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  DTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYF
Query Conservation                        
   
 
      
   
  

 

 
    
   









 




 

 
 
Alig confidence 















































































Template Conservation                        
   
 
      
   
  

 

 
    
   









 




 

 
 
Template Sequence  DPASDQMQHWKEQRAAQKADVLTTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYF
Template Known Secondary structure 
TTTTTTTS




B
TT

B
S
SSS

BSSTTS
B
TT
TT





SS

S
Template Predicted Secondary structure 




































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   139140.........150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  QPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFV
Query Conservation    
 
 
 

 
  
   

 


 





 
  




 











 


 





 







  

  
Alig confidence 















































































Template Conservation    
 
 
  
 
  
   

 


 




  
  

 

 









 
 

  


 

 







  
   
Template Sequence  EVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPILFPSFI
Template Known Secondary structure 
S

TTT


GGGSSTT

SSS
TTS
SSSSS

TTSSSS
S
SSGGG
Template Predicted Secondary structure 








































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  HAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAG
Query Conservation   
 

 
 
  
    

    

    


 
    
 
 
  
 

     





 


  
    

 
  
  
Alig confidence 











....































































Template Conservation   
 
  
 
   ....
     

    


      
 
 
  
 

    






 


  
    

    
  
Template Sequence  HSQKRNPQTHLK. . . . DPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQG
Template Known Secondary structure  SB
TTT
SB....

GGGTSGGGSBSSSTTS


S

TTS
TT
Template Predicted Secondary structure 








....


























Template SS confidence 















































































   166...170....... ..180.........190.........200.........210.........220.........230.........240.
 
   299300.........310.........320.........330.........340.........350.........360.........370........
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRN
Query Conservation     

 


   

 




  

  

  
  
 
 
 


    
         
 




    


 

 
 



Alig confidence 















































































Template Conservation     
  


  
   




  

   
  
    
 
 


    
       
 
 

 


   
 
 

 
 


 
Template Sequence  IKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRN
Template Known Secondary structure 

B


TTTT




SS
TT
TT



TTTS


Template Predicted Secondary structure 










































Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   379380.........390.........400.........410.........420.........430....... ..440.........450.......
Predicted Secondary structure 

































.
















Query SS confidence 


























































.



















Query Sequence  PDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPT. CPYHNFQRDGMHRMGIDTNP
Query Conservation 
 
 


 

 

 
  





 
 




 
 


 


  

 
 
  




 
 .    
  


          
Alig confidence 












































.












.



















Template Conservation    
 
 
 

  
 
  

 

  
 




 
 


 


  

.
 
  




 
      
  


 
    
   
Template Sequence  PVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRL. GPNYLHIPVNCPYRARVANYQRDGPMCMQDNQGG
Template Known Secondary structure 
SSTTT



TT


TT
S
T.
TTGGGSGGGS
TTS


SS



TT

S
TTTT
Template Predicted Secondary structure 






















.






























Template SS confidence 















































































   322.......330.........340.........350.........360...... ...370.........380.........390.........400
 
   458.460.........470.........480.........490.........500.........510.. .......520.........530.....
Predicted Secondary structure  .




































.




Query SS confidence  .






















































.






















Query Sequence  . ANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFW. LSQTPFEQRHIVDGFSFELSKVV
Query Conservation  .  
 

      
                    
   
       
   


 
 .      

  

      
  
 
Alig confidence  .












........












.



















.





















.
Template Conservation   


 


      ........            
.          
   
 
 
         
  
  
    
   .
Template Sequence  APNYYPNSFGAPEQ. . . . . . . . QPSALEHSIQYSG. EVRRFNTANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDA.
Template Known Secondary structure 


SSS
SS




........
GGG







S.
SS



TTS

STS
TTS.
Template Predicted Secondary structure 













........









.














.
Template SS confidence 















































































   401........410.... .....420....... ..430.........440.........450.........460.........470
 
   536...540.........550.........560..
Predicted Secondary structure 



Query SS confidence 


























Query Sequence  RPYIRERVVDQLAHIDLTLAQAVAKNL
Query Conservation     
  
       

  
  


  
Alig confidence 


























Template Conservation     
  
       

  
   

  
Template Sequence  QIFIQKKAVKNFTEVHPDYGSHIQALL
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 


























   471........480.........490.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions