Job Description P21179 Confidence 99.55% Date Thu Jan 5 11:38:00 GMT 2012 Rank 27 Aligned Residues 136 % Identity 19% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.																	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	V	V	A	I	L	L	N	D	E	V	R	S	A	D	L	L	A	I	L	K	A	L	K	A	K	G	V	H	A	K	L	L	Y	S	R	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	A	D	D	G	T	V	L	P	I	A	A	T	F	A	G	A	P	S	L	T	V	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	T	V	L	I	L	C	G	D	Y	X	E	D	Y	E	V	X	V	P	F	Q	A	L	Q	A	F	G	I	T	V	H	T	V	C	P	G	K	K	A	G	D	S	C	P	T	A	V	H	D	F	C	G	H	Q	T	Y	F	E	S	R	G	H	N	F	T	L	N	A	T	F	D	E	V	D	L	S	K	Y	D
Template Known Secondary structure											T	T																T	T								T	T			T	T											S	S	S	S	S													S		G	G	G			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		664	.	.	.	.	.	670		.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure									.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	I	V	P	C	G	.	N	I	A	D	I	A	D	N	G	D	A	N	Y	Y	L	M	E	A	Y	K	H	L	K	P	I	A	L	A	G	D	A	R	K	F	K	A	T	I	K	I	A	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		G	L	V	I	P	G	G	R	A	P	E	Y	L	A	L	T	A	S	V	V	E	L	V	K	E	F	S	R	S	G	K	P	I	A	S	.	I	H	G	Q	L	I	L	A	A	A	D	T	V	N	G	R	K	C	T	A	Y	A	T	V	G	P	S	L	V	A	A	G	A	K	W	V	E	P	I	T	P	D	V	C
Template Known Secondary structure								B	T						T	T														T	T						.			T								T			T	T							G	G	G							T	T							S	S	T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
			714	.	.	.	.	.	720	.	.	.	.	.	.			.	.	.	730	.	.	.	.	.	.
Predicted Secondary structure		.														.	.
Query SS confidence		.														.	.
Query Sequence		.	G	E	E	G	I	V	E	A	D	S	A	D	G	.	.	S	F	M	D	E	L	L	T	L	M
Query Conservation		.														.	.
Alig confidence		.														.	.
Template Conservation
Template Sequence		V	V	D	G	S	L	I	T	A	A	T	Y	E	G	H	P	E	F	I	Q	L	F	V	K	A	L
Template Known Secondary structure					T	T					S	S	G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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