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Job Description | P21179 | Confidence | 98.88% | Date | Thu Jan 5 11:38:00 GMT 2012 |
Rank | 46 | Aligned Residues | 107 |
% Identity | 12% | Template | c3bhnA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:thij/pfpi domain protein; |
PDBTitle: crystal structure of a dj-1/pfpi-like protein (shew_2856) from2 shewanella loihica pv-4 at 1.76 a resolution
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Resolution | 1.76 Å |
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602 | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | |
. | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | |
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Predicted Secondary structure |   |
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Query Sequence |   |
V | V | A | I | L | L | N | D | E | V | R | S | A | D | L | L | A | I | L | K | A | L | K | A | K | G | V | H | A | K | L | . |
L | Y | S | R | M | G | E | V | T | A | D | D | G | T | V | L | P | I | A | A | T | F | A | G | A | P | S | L | T | V | D | A | V | I | V | P | C | G | . |
N | I | A | D | I | A | D | N | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | V | G | I | V | L | F | D | D | F | T | D | V | D | F | F | L | X | N | D | L | L | G | R | T | S | D | S | W | T | V | R | I | L | G | T | K | P | E | H | H | S | Q | L | G | X | T | V | K | T | D | G | H | V | S | E | V | K | E | . |
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Q | D | V | V | L | I | T | S | G | Y | R | G | I | P | A | A | L | Q | D |
Template Known Secondary structure |   |
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| S | S | S |  |  |  |  |  |  |  | S | S | S |  |  |  | B | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
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. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
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680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | A | N | Y | Y | L | M | E | A | Y | K | H | L | K | P | I | A | L | A | G | D | A | R | K | F | K | A | T | I | K | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | N | F | X | S | A | L | K | L | D | P | S | R | Q | L | I | G | S | I | C | A | G | S | F | V | L | H | E | L | G | L |
Template Known Secondary structure |   |
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|  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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